Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0579 |
Symbol | |
ID | 8251666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 696261 |
End bp | 697397 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644934227 |
Product | Linoleoyl-CoA desaturase |
Protein accession | YP_003090863 |
Protein GI | 255530491 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3239] Fatty acid desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAAA AGATTAAGTT CACGAATGTT GAGCAATCAA CATTTTATGT GACTGTGCGG AAAAGGGTAG ATGCTTATTT TACTGAAAAT GATATTTCGA TACATGCCAA CGGGGCCATG TGGTTCAAAA CCATCTTTTT TCTGACGGGA CTGCTTAGCA TTTATTTACT GATATTGCTG GGTGGCTTTA ACGCCACAAT CAGCATCCTG TTGTGTGTAC TGCTTGGTAT GTTTGGAGCC TTTGTGGGGT TTAATGTTTG TCATGATGCC ATTCACAAAG CCTACTCCTC CAATGCCACA ATAAACAAAC TGTTTAGTTT TATTTTTAAT TTAATTGGCG CAAGCCCCTA TGTATGGAAT ATATGCCATA ACATTGTTCA CCATACCTAC ACCAATATTG CAGGGCATGA TGAGGATATC GATGTTGCAC CCGGACTTAT CCGCTTTTCG GAAGCTGAAA CAGTAAGCAA AGTGCAATCG TATCAGCATT ATTATGCATT TGTGTTGTAC AGCTTCGCCA TGCTTTCATG GGTATTCAGA AAAGATTACA AGAAGTTTTT TCAGAAAAAA ATTGGCGAGC ATGTACATAA CCATCCAAAA ATTGAATATT TCAACCTTTT CTTTTATAAA GCCATTTATT ACTTCCTGTT TATCGTACTG CCATTACTGG TCATGAACAT TAGCTGGTGG CAGTTTGTGA TTGGTTTTCT GGTGATGCAG TTTGCTCAGG GACTGGTATT GGGCCTGGTT TTTCAGCTGG CACACGTGGT TGAAGGCACC AGCTTTCCTT TTCCCAATGA CGAAGGCAAT ATTGAAGAAG CCTGGGCTGT GCACCAAATG CGGACAACTG CAAATTTTGC CGTAGAATGT AAGCTGACAG GCTTTTTATG CGGGGGCTTA AACAGACAGG TTGAGCATCA CCTGTTTCCT AAAATATGTC ACATTCACTA CCCTGCCATC GGGGCTATCG TAAAGCAGAC CGCTGCAGAG TTTAACCTGG ACTATATAGA AAGTTCTTCG TTTGGAACTG CGCTGATATC ACATTACAAA ACCCTGAAAA GACTGGGCAG GGAAACCTAC CTGGAAACAC CTTATATCAA CAGGCAGATA CCCGTGCTAT TGGTTGTTGA AAAATAA
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Protein sequence | MGKKIKFTNV EQSTFYVTVR KRVDAYFTEN DISIHANGAM WFKTIFFLTG LLSIYLLILL GGFNATISIL LCVLLGMFGA FVGFNVCHDA IHKAYSSNAT INKLFSFIFN LIGASPYVWN ICHNIVHHTY TNIAGHDEDI DVAPGLIRFS EAETVSKVQS YQHYYAFVLY SFAMLSWVFR KDYKKFFQKK IGEHVHNHPK IEYFNLFFYK AIYYFLFIVL PLLVMNISWW QFVIGFLVMQ FAQGLVLGLV FQLAHVVEGT SFPFPNDEGN IEEAWAVHQM RTTANFAVEC KLTGFLCGGL NRQVEHHLFP KICHIHYPAI GAIVKQTAAE FNLDYIESSS FGTALISHYK TLKRLGRETY LETPYINRQI PVLLVVEK
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