| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0518 |
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| Symbol | |
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| ID | 8251605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 626487 |
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| End bp | 627938 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644934168 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003090804 |
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| Protein GI | 255530432 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00138157 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTTTAT CAATTGAACA TAAAATGAAT GTCATGAATA TCAAACATAA AATCCTGTTG
ATGGCCCTGG TGCTGCTATC TGCTTCGGGT TGTAAAAAGT CTTTTCTTGA ATTGGCACCG
GAATCCAATG CAAACGCCGA AACGTTCTAC AAAACGAAAG CAGATATGGA CCTTGCTGTA
AATGCCGCCT ATTCTACACT TTATAATGTC TATGATCCTG AAGGTCCGGT ATCCTATACT
GCAGAAATGA TGGGTGACAA CACCACACTG TACATCATTG CCGGAAATCA GACAGATAAA
TTTGCATTTA AAGATTACAA CCTGCAAACC AACAATACGA TGGTATACAG TTTCTGGAGG
ACCTATTATT CCTCTCTGTA CAGCATCAAC ATTATTTTGA GTAAACTTGA TGATTCGGAG
CTGACGGCGA CAGAAAAGGA AAGTGTAAAA GCGCAGATGT CTTTTCTGAG GGGATTGTAT
TACTTCAATA TGGTGCGTTT ATGGGGAGAT GTTCCCATCG TAACGAAACC GCTTTCAGTA
GAAGAAACCT ATAAGGTAGT CCGTTCGCCC AAAGCAGACG TGTATAAGTT GATTTTGGAC
GATCTGACTT TCGCTGCAGA AAAATTACCG CCGACTGCAG TTGGAAGAGC TACACAAGGC
GCAGCTTTAA CCGCTAAAGG AGAAGTTTAC CTCACTTTAA ACGATAAGGC CAATGCAACA
ACGGCTTTAA TGTCGGTATA CACCAGCCAG AATTATAAGT TGCAGGGTAC TTATGCCGCG
GTATTTGGTC CGACAGTGAA AAATACTAAA GAATCCATCT TTGAAATTCA ATATCTTGGC
GGGGCAAGCA GCATATCGAC TGGTACCTAC AGCAAATATT ACCGCAATTA TTCTCCAAAT
GTAAATGTAT TTGGGTTTAG TGGGATTGGT ATGAACCAGG TGACCGACGA TCTGTACAAT
GAATATGAAA CGGGCGATCC AAGACGTGAG CTCAGTATAA CCCTGGGTTT TCAGAACGGG
GCGGTATTCC AGGAACAGAA ATATCCGATC AAATGGATAG ATCCAACTGC GGTTAAAACA
GATAACAATG TGCTGGCCAA CAACAATTTC ATGGTTTATC GCTTTGCAGA TGTCTTGCTG
ATGCTTTCGG AAGCGACTGA CGATCCGAAA TACCTCAATG AAGTCAGGAC AAGGGTAAAC
TTGCCTTTAT TTGGAACGCC GGGTTATCCT TCTGCAAAAT ACCCTACACT GGCCCTCGCC
ATTGAACATG AAAGAAGGGT AGAGCTGGCC ATTGAGTTTC ACCGCTGGTT TGACCTGAAA
AGAACGGGTC GTGCGGTCGC TGTTTTAAGT GCAAAAGGAA AGCCGGTTAC TGAGAAAAAG
CTTTTATTGC CGATTCCGGA GACCGTTAGG TTGCAAAATG GAATTATTAC ACAGAACGAC
GGCTACAACT AA
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| Protein sequence | MVLSIEHKMN VMNIKHKILL MALVLLSASG CKKSFLELAP ESNANAETFY KTKADMDLAV
NAAYSTLYNV YDPEGPVSYT AEMMGDNTTL YIIAGNQTDK FAFKDYNLQT NNTMVYSFWR
TYYSSLYSIN IILSKLDDSE LTATEKESVK AQMSFLRGLY YFNMVRLWGD VPIVTKPLSV
EETYKVVRSP KADVYKLILD DLTFAAEKLP PTAVGRATQG AALTAKGEVY LTLNDKANAT
TALMSVYTSQ NYKLQGTYAA VFGPTVKNTK ESIFEIQYLG GASSISTGTY SKYYRNYSPN
VNVFGFSGIG MNQVTDDLYN EYETGDPRRE LSITLGFQNG AVFQEQKYPI KWIDPTAVKT
DNNVLANNNF MVYRFADVLL MLSEATDDPK YLNEVRTRVN LPLFGTPGYP SAKYPTLALA
IEHERRVELA IEFHRWFDLK RTGRAVAVLS AKGKPVTEKK LLLPIPETVR LQNGIITQND
GYN
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