| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0435 |
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| Symbol | |
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| ID | 8251520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 509980 |
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| End bp | 511899 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644934083 |
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| Product | AAA ATPase |
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| Protein accession | YP_003090721 |
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| Protein GI | 255530349 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAACG GTGCGGCTTC CCATTCAATT TCTGACAAGG TTTTATCTTT CATTGACTTT
ACCAATCAGA ACATTTTTCT GACCGGAAAG GCCGGAACCG GAAAAACTAC TTTGTTGAAA
CGCATCAAAG AAAGCAGCAG CAAAAAGATG GCAGTTGTGG CCCCTACAGG TGTTGCGGCC
ATGAACGCGA AAGGCAGTAC CATCAATTCT TTTTTTCAAC TGCCCCCGGG TTCCTTTTTC
CCGGGCGACA TTAGCCTGGA AAACCTGCAG TCGGGTTTCC TTTCTATACA GTCGATGGTT
GCCGACCTGA GCTATACCAG GGATAAGCTC AGCCTGTTTA ATGAACTGGA ATTGCTGGTG
ATCGATGAGG TATCCATGGT ACGTTGTGAC CTGCTGGATG TAATTGATGC CATCCTCCGT
TCGGTAAGAA AAAACAATAT GCCCTTTGGG GGTGTGCAAT TGCTCCTTAT TGGCGACCTG
TACCAGTTGC CACCGGTAAC CAAAAGGGAA GACTGGTCGT TTTTAAGTCG CGCCTACCCC
TCACCTTACT TTTTCGATGC CCTGGTGATC CGCCGTTATC CACTACTACA AATAGAGCTG
ACCACAGTTT TCAGGCAAAC GGAAATAGAA TTTATCCAGA TTTTAAATGA CATCAGGAAC
AACCAGATCG ATGAAAGCGG CCTGGCCCTG TTAAATAAAA GGTACGACCC GCAGTTCAGT
GCTGTGGATG GGTTGAACCC CATCATCATC ACTTCCCATA ATGCGGAAGC CAATGCCATC
AATAAAGAGA AGCTGGAGGA GCTGCCCGGC ACCGAATATA CTTTTGAAGC CGAAGTGAGC
GGAGAGTTCA GGGACCTGAG CCTGCAGGCC GAACAAACCT TAAAACTGAA AGAGGGTGCA
CAGGTCATGT TCATCAAAAA CGACACCGGC GAAGACAGAA AATTTTATAA TGGAAAGATC
GGCAAGGTAA AGTCGGTAAA CGGGGCCGGG ATCTGGATTT CCTTTCCACA GGAGGAAGAT
CTTTTGCTTG AAAAAACTTC ATGGGCCTCT TTCGAATACA AAACCGATAC TGAAGAAGCC
ATTGTACAGC AGCAGGTAGG CGAGTTTTCG CAATATCCGG TTAAGCTGGC CTGGGCGGTA
ACCATTCACA AGAGCCAGGG CCTGACCTTC GACCAGGCGG TGATTGATGC AGGCAAATCT
TTCGTAGCAG GCCAGGTATA TGTGGCTTTA AGCCGTGTAA GAACACTGAA CGGACTGGTG
TTAAAATCAA GGATCGGCAC GGAAAGTTTA AGGTCGAATA CCGAGGTGAT CAATTATATG
AAACCGGTGA AGGAAGAGGA GCTGGATGCC ATCCTGATCA GGGAACAGGA AAAATTTATC
CTGCAGCTGG TACTTGATCA TTTTTCTTTG AACAGTGTTT TAAGGGGGCT GGACGTTGTT
TCGGGCAACG CTGAAATAAA CAAAGCAAAC CTATCTGAAT TTAAGGCTTT AATGGGACAG
CTGAATACTT CGCTTACGGC ACTGATGACC TTGACAGAAC GTTTTCAAAC ACAGGTAAGG
CAATTGCACC AAAAAGAAGG TTTTGCAGCA TTAACTGCCT TGCAGGAAAG GATTACTTCG
GCACATACTT ATTTTACCAA AGAGCTTACC ATGCAGCTTT TAAATCCGGT GAACAAGAAC
ATCAGGATTA AGCCCAAGAA TAAAATCCAG CAGCAAATTG TGCACCTGTT ACAGAAATAC
CGTCAGGTAA TTGAAAACAA ACTGGCTTTG ATACAGCTTG CCTCGGGGCT GCTGGCAGGG
CCGATTAAAA AAGAGGATTA TGCAGCATGG ATTGATCAGC ATAACGTTAA ACCTAAGAGC
AAAAATGGTT CGTTTGCTGC GGTTGCAGCA CAGCAAACGA CCAATTTATC TTTGTTTTAA
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| Protein sequence | MTNGAASHSI SDKVLSFIDF TNQNIFLTGK AGTGKTTLLK RIKESSSKKM AVVAPTGVAA
MNAKGSTINS FFQLPPGSFF PGDISLENLQ SGFLSIQSMV ADLSYTRDKL SLFNELELLV
IDEVSMVRCD LLDVIDAILR SVRKNNMPFG GVQLLLIGDL YQLPPVTKRE DWSFLSRAYP
SPYFFDALVI RRYPLLQIEL TTVFRQTEIE FIQILNDIRN NQIDESGLAL LNKRYDPQFS
AVDGLNPIII TSHNAEANAI NKEKLEELPG TEYTFEAEVS GEFRDLSLQA EQTLKLKEGA
QVMFIKNDTG EDRKFYNGKI GKVKSVNGAG IWISFPQEED LLLEKTSWAS FEYKTDTEEA
IVQQQVGEFS QYPVKLAWAV TIHKSQGLTF DQAVIDAGKS FVAGQVYVAL SRVRTLNGLV
LKSRIGTESL RSNTEVINYM KPVKEEELDA ILIREQEKFI LQLVLDHFSL NSVLRGLDVV
SGNAEINKAN LSEFKALMGQ LNTSLTALMT LTERFQTQVR QLHQKEGFAA LTALQERITS
AHTYFTKELT MQLLNPVNKN IRIKPKNKIQ QQIVHLLQKY RQVIENKLAL IQLASGLLAG
PIKKEDYAAW IDQHNVKPKS KNGSFAAVAA QQTTNLSLF
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