Gene Phep_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0429 
Symbol 
ID8251514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp501556 
End bp502434 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content46% 
IMG OID644934077 
ProductUbiA prenyltransferase 
Protein accessionYP_003090715 
Protein GI255530343 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.270535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.910101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAAAT TATTAGGATA TATCAGGCTG ATGCGACCGG CCAATGTAGT TACTGCTGTG 
GCCGATGTAC TGGCGGGGAT GGCCCTGGCA GGGTATTTTA TGGGCACCGC CAGCTACCTG
CCCGTCCTGC TGCTTTGTTT ATCTACCATA GGCCTGTATA GCGGGGGCAT TATTTTAAAT
GATGTTTTTG ATGCAGAACT GGATGCCAGG GAGCGGCCGG AACGGCCAAT TCCAAGCGGT
CTGATCTCAA AAAAAGCAGC CACCCTATTT GGCGGGATAT TCTTCTTTAT CGGCATTTTT
ACAGCAGGGC TTTACAACCC GGCTTCACAG TATCTGGCAG CGGCCATTAT GGTCTCCTGC
CTCATTTACG ATAAATTCCT GAAGCACAGC GCAATATTCG GACCTTTGAA TATGGGGCTT
TGCCGGGGCC TGAATTTGCT GCTGGGCATG AGCATTATCC CCTCTGCTAT ACAACAATGG
TGGTTTTTGG CTATAGTACC CATTATTTAC ATTGCCTCGG TTACCATGGT AAGCCGGGCT
GAAGTGCATG GCGGAAGTAA GAAAATGCTT TATTTTGCCG CACTTTTATA TACGCTTGTC
ATTTCCAGCA TCCTGTTTTT TGGCATAAGA CAAGGCAACC TGCCACTTAC CGCCGTATTT
GTACTGGGCT TTGCACTGAT GATATTTATT CCATTGTTAA GGGCGATGAA AAATCCCATT
GGCCCCAACA TTGGCAAAGC AGTAAAGGCA GGTGTAATTG CTTTAATTTT AATGAATGCA
GCCTGGGCAA GTGCATTTGG AATGGTACAG ATAGCCTTAT TTATTGTTAT TTTATTACCA
GTATCGTTAA TGCTGGGTAA GGCATTTGCC GTAACCTAG
 
Protein sequence
MKKLLGYIRL MRPANVVTAV ADVLAGMALA GYFMGTASYL PVLLLCLSTI GLYSGGIILN 
DVFDAELDAR ERPERPIPSG LISKKAATLF GGIFFFIGIF TAGLYNPASQ YLAAAIMVSC
LIYDKFLKHS AIFGPLNMGL CRGLNLLLGM SIIPSAIQQW WFLAIVPIIY IASVTMVSRA
EVHGGSKKML YFAALLYTLV ISSILFFGIR QGNLPLTAVF VLGFALMIFI PLLRAMKNPI
GPNIGKAVKA GVIALILMNA AWASAFGMVQ IALFIVILLP VSLMLGKAFA VT