Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0404 |
Symbol | rnhB |
ID | 8251489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 476384 |
End bp | 476995 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644934052 |
Product | ribonuclease HII |
Protein accession | YP_003090690 |
Protein GI | 255530318 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.505687 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTATTGA ACTGTTATCA GCAAGAATTT ATAGAAGCCG GATGCGATGA AGCTGGGCGG GGCTGTCTGG CAGGACCTGT ATTTGCTGCT GCAGTGATTT TGCCGCCAGA TTTTATTGCC GGGGAGCTGA ATGATTCAAA ACAGCTTAAT CATCAGCAAC GTAAAAGACT TAGGATCATT ATAGAAAAAG AGGCCATCGC ATGGGCAGTT GCTGAAGTTG ACAATATAGA AATTGATCAG ATCAATATTT TGAATGCCTC CTTTCTCGCT ATGCACAGGG CCATAGAGAA ATTACTGGTT AAACCCCAAT ATTTAAGTAT TGACGGCAAC CGGTTTAAAA AATATCCTGA TATCCCCCAT GCCTGTATTG TTAAAGGAGA TGGTAAATAC CTGAACATAG CAGCGGCCTC CATATTGGCC AAAACTCATA GAGATGAGTT TATGGAACGT ATTTCAGATG AATATCCGCA TTATCAATGG CATCAGAATA AAGGCTACCC AACAGTGGTA CACCGTTCTG CTGCACTTGA GCATGGTTTA TCGCCATATC ATCGTAAAAC TTTTACAGTT AGTCCCCCTC AACTTAACCT GTTTTCCGAA ATAGAGGGAT AA
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Protein sequence | MLLNCYQQEF IEAGCDEAGR GCLAGPVFAA AVILPPDFIA GELNDSKQLN HQQRKRLRII IEKEAIAWAV AEVDNIEIDQ INILNASFLA MHRAIEKLLV KPQYLSIDGN RFKKYPDIPH ACIVKGDGKY LNIAAASILA KTHRDEFMER ISDEYPHYQW HQNKGYPTVV HRSAALEHGL SPYHRKTFTV SPPQLNLFSE IEG
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