Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0339 |
Symbol | |
ID | 8251424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 395889 |
End bp | 396863 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644933987 |
Product | amidohydrolase 2 |
Protein accession | YP_003090625 |
Protein GI | 255530253 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGAA GGAAATTTTT TGCCAGTACC GGACTTTCAG CGGCCGGGCT GATCGTATCA GAAAGCCTTT TTGGAATAAA TTCAAAGGTA GAAACTGCGC AGGCCAGCAC CAGTGCCCTG GCTGGCAGGT ACGACATCAT GAAAGAAGTG ATGAAGTACC CTAAAATAGA TGCCCATGTG CATGTTGATC TTGGAAACAG TGATCCGGCG GCACAAAAGA AGTTTGCTGA AGTGCTGATC GATTATGCAG ACCGGCTCAA TATCCGGAAA CTGGTCCTTT CAAAGCCGGT AACCAGGCTC ATCAAAGGGA TTCCGGATGG CAGCGTGGAA GCATTTATCG ACCACAACAA CATCATACTT GGTGTGATGA AGCTGCATCC CGACCGGTTT ACCGGGAGCT TTACCTTTAA TCCGGTACAC CTTAAGGAAT CCATGGATGA AATCAAGAGA TGCGTTGACC AGGGGATGGT TGGCGCAAAA ACCTATTACC AGACAAAGAT CAGCGATCCG GCATTCTATC CGATAGTGGA AAAAATGATC GACCTGAAAA TGATCATCCA TACCCATGCC GAAACGCAGC TGGGCGTGGG CGGCTACCGC ATGATATACG ATGGGCGCAA ACCCCTGAAT GTGTCTATCC CGGAAGATTT TGTGGCCATT GCCAAAAGAT ACCCGGAAGG TATGTTCCAG CATGCGCATA TAGGCGGTGG AGGCGATTGG GAGTACATGT GCAAAGCCTT AAAACACAGT CCGAATGTAT ATGTTGACAC TTCGGGAAGT AACAACGAAG AATGGATGAT TGATTTTGCA TTGCAGGAGC TTGGAGAAGA CCGTCTGCTT TTTGGTTCTG ACAATATGTA TTACCAGAGT GTAGGCAAGA TCCTGGCTTC TAACCTGAAT GAAAGCCAGA GAAAAAAGAT ATTTTTTGAA AACTTTAACA ATATTTTAAG AAAAGGAGGA CACCATGTTG ATTGA
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Protein sequence | MNRRKFFAST GLSAAGLIVS ESLFGINSKV ETAQASTSAL AGRYDIMKEV MKYPKIDAHV HVDLGNSDPA AQKKFAEVLI DYADRLNIRK LVLSKPVTRL IKGIPDGSVE AFIDHNNIIL GVMKLHPDRF TGSFTFNPVH LKESMDEIKR CVDQGMVGAK TYYQTKISDP AFYPIVEKMI DLKMIIHTHA ETQLGVGGYR MIYDGRKPLN VSIPEDFVAI AKRYPEGMFQ HAHIGGGGDW EYMCKALKHS PNVYVDTSGS NNEEWMIDFA LQELGEDRLL FGSDNMYYQS VGKILASNLN ESQRKKIFFE NFNNILRKGG HHVD
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