| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0208 |
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| Symbol | |
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| ID | 8251293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 243974 |
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| End bp | 244759 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644933858 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_003090496 |
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| Protein GI | 255530124 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0882102 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACATCC ATTTCTTCAA ATACCAGGGC GCAGGAAACG ATTTTATCCT GATTGACCAC
AGTGCAAGTC CAATCAAAGA TATTGATTAT GAATGGGTTA AAAAAATATG CGACAGACGT
TTTGGTGTCG GCGGAGACGG GCTGATGTTT CTGACCAGCC ATCCTGATTA TGATTTTGAG
ATGCTTTATT TTAACTCAGA CGGCAGGCCG GGCAGTATGT GTGGCAACGG GGGCAGGTGC
ATTGTAGCTT TTGCCAAACA CCTGGGTATC ATTGACAAAG AAACTAACTT TTTGGCAGTA
GATGGCCCGC ACTATGCCAA AATTTCAGCT GAGGGCAACT GGGTAGAGCT GCAGATGATA
GATATTGACA CCATCGGCAG GGATGGAGAA GCTTATGTGC TGAACACCGG ATCTCCACAT
TATGTTGCCC GCATGGAAAA CCTGGCTACT TATGATGTTT ACCATGAAGG CAAGGCTATA
CGCAACAATG AGACCTATAA AAAAGAGGGC ATCAATGTAA ACTTTGTAGA AGACAAAGGC
GACCATCTGT TTGTACGCAC CTTTGAACGT GGCGTAGAGG ATGAAACCTA TGCCTGCGGT
ACAGGAGTTA CAGCAGTAGC TTTATCTATG GCCCTGCACA AACAGCAAAG CGGACACCTC
AAAACACCTG TTAAGGTGCT GGGCGGCGAT TTAAGTGTAG AATTTGATTA CAATGGCCGG
CAGTTTACAA ATGTGTTTTT ATGTGGCCCT GCCGAAAAAG TGTTTGAAGG CGAGCTGAAC
TGGTAA
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| Protein sequence | MNIHFFKYQG AGNDFILIDH SASPIKDIDY EWVKKICDRR FGVGGDGLMF LTSHPDYDFE
MLYFNSDGRP GSMCGNGGRC IVAFAKHLGI IDKETNFLAV DGPHYAKISA EGNWVELQMI
DIDTIGRDGE AYVLNTGSPH YVARMENLAT YDVYHEGKAI RNNETYKKEG INVNFVEDKG
DHLFVRTFER GVEDETYACG TGVTAVALSM ALHKQQSGHL KTPVKVLGGD LSVEFDYNGR
QFTNVFLCGP AEKVFEGELN W
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