| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0185 |
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| Symbol | |
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| ID | 8251270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 215212 |
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| End bp | 216468 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644933835 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003090473 |
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| Protein GI | 255530101 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.684859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATTTCA AAGATTTTAA TTTTAACCCC GAATTACTGG AAGGGTTATT AGCCATGGGG
TTTCGCAACG CAACCCCAAT CCAGCAGCAG GCTATTCCGC TTATTTTAAA TAAGAAAGAT
TTAATTGCCT GTGCACAAAC AGGAACCGGA AAAACGGGTG CCTACCTTTT GCCGATCATG
AATATGATTG TGGAAACGGA AAACCGGCAT AACAATACCC TGATACTGGC CCCGACAAGG
GAGCTTGCCC AGCAGATAGA CCTGCAGGTA GAAGCCCTGT CTTATTTTAC CAACATCAGC
TCGTTAACGG TTTATGGTGG TGGCGACGGC ATTGCCTATG AACAGCAAAA AAGGTCGATG
CGGGAAGGTG TAGACCTCAT TATCGCCACT CCCGGGCGTT TGATTTCCCA CCTTTCATCA
GGAGTATTAA AGCTGGATCA GTTACAGCAC CTGGTGCTGG ACGAGGCAGA CAGAATGCTG
GACATGGGCT TTTACGATGA CATTATGCGC ATAGTAAGCT ACCTGCCTCA GGTAAGGCAA
ACTGTAATGT TTTCGGCTAC CATGCCGCCG AAGATCAGAA AACTGGCAGC AACACTGCTG
AAGCATCCTG AACAAATTAA CATTGCTTTG TCTAAACCCG CAGAAGGCAT ATTACAGCAG
ATCTATTTTG TTCATGATGA ACAAAAAGTA CCCTTGCTAA CTGATGTGTT AAAAACAGGT
GAATATAAGA GCATCATTAT TTTTGCCTCT ACCAAAGAAA AAGTAAAAAA CCTGGGCAAG
GTATTCCGTA CCCTGGGCCT TAAAGCGGAA GCATTTCATT CTGACCTCGG ACAAAGTGAA
AGAGAAAGCA TTTTACTGAA GTTTAAAAAC AAGCAATTGC CCATCCTGAT TGGTACGGAT
GTATTGAGCA GGGGGATTGA TGTGGAAGGT ATAGATCTGG TCGTGAATTT TGACGTGCCC
CATGATGCAG AAGATTATGT GCACCGCATT GGGCGTACCG CCAGGGCTGC AACCAAAGGA
ACTGCCATAA CCCTGGTAAA TAGCCGGGAC AAGCGTAAGC TGGTCAGTAT TGAAAAACTG
ATAGAAAAGG AGATTGACAG GATTCCTTTG CCGGAGCACC TTGTGGCAAT ACCAGAGGCA
ACCACTGAAC GCCATGCAAA GCCAAAACCA GCAGCACAAA AATCAGGATC GGGTAAGCCA
AAACGTAAAT TCTGGAATAA AAAACCCAAA GCAAGTTCTA AAGAAGGCGG AGCCTAA
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| Protein sequence | MDFKDFNFNP ELLEGLLAMG FRNATPIQQQ AIPLILNKKD LIACAQTGTG KTGAYLLPIM
NMIVETENRH NNTLILAPTR ELAQQIDLQV EALSYFTNIS SLTVYGGGDG IAYEQQKRSM
REGVDLIIAT PGRLISHLSS GVLKLDQLQH LVLDEADRML DMGFYDDIMR IVSYLPQVRQ
TVMFSATMPP KIRKLAATLL KHPEQINIAL SKPAEGILQQ IYFVHDEQKV PLLTDVLKTG
EYKSIIIFAS TKEKVKNLGK VFRTLGLKAE AFHSDLGQSE RESILLKFKN KQLPILIGTD
VLSRGIDVEG IDLVVNFDVP HDAEDYVHRI GRTARAATKG TAITLVNSRD KRKLVSIEKL
IEKEIDRIPL PEHLVAIPEA TTERHAKPKP AAQKSGSGKP KRKFWNKKPK ASSKEGGA
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