Gene Phep_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0174 
Symbol 
ID8251259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp204028 
End bp204420 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content38% 
IMG OID644933824 
Productresponse regulator receiver 
Protein accessionYP_003090462 
Protein GI255530090 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAAAA AAACAGTAAC ATATAAAAAA ATTCTTGTGA TTGAAGACAA TCATGCCATA 
CTAGATGTCA TTACATTAAT CCTTCAAAGC GAGTCCTATA AAGTAAATGG ATTAAATAAG
AGCGTGGATA TGATGATGCA CATCAACGAG TCGAGGCCAG ACCTGATCAT TTTAGACATT
ATGTTACCGG ATGGTGATGG CAGGACTTTA TTAAAAGAGA TCAGGACCAA CCCTGCCACT
GAGAACATAC CAGTGCTGAT GATTTCTGCA AAATATACCG CCCAGAACAT CCAGCATGGT
GAATACAAAC CCAATGGCTT TTTACCAAAA CCTTTTGACA TAGATGATCT CCTGGACAGG
ATTGAAGGGA TACTTGCCGG AAAAACCTAT TAA
 
Protein sequence
MKKKTVTYKK ILVIEDNHAI LDVITLILQS ESYKVNGLNK SVDMMMHINE SRPDLIILDI 
MLPDGDGRTL LKEIRTNPAT ENIPVLMISA KYTAQNIQHG EYKPNGFLPK PFDIDDLLDR
IEGILAGKTY