Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0174 |
Symbol | |
ID | 8251259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 204028 |
End bp | 204420 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644933824 |
Product | response regulator receiver |
Protein accession | YP_003090462 |
Protein GI | 255530090 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAAAAA AAACAGTAAC ATATAAAAAA ATTCTTGTGA TTGAAGACAA TCATGCCATA CTAGATGTCA TTACATTAAT CCTTCAAAGC GAGTCCTATA AAGTAAATGG ATTAAATAAG AGCGTGGATA TGATGATGCA CATCAACGAG TCGAGGCCAG ACCTGATCAT TTTAGACATT ATGTTACCGG ATGGTGATGG CAGGACTTTA TTAAAAGAGA TCAGGACCAA CCCTGCCACT GAGAACATAC CAGTGCTGAT GATTTCTGCA AAATATACCG CCCAGAACAT CCAGCATGGT GAATACAAAC CCAATGGCTT TTTACCAAAA CCTTTTGACA TAGATGATCT CCTGGACAGG ATTGAAGGGA TACTTGCCGG AAAAACCTAT TAA
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Protein sequence | MKKKTVTYKK ILVIEDNHAI LDVITLILQS ESYKVNGLNK SVDMMMHINE SRPDLIILDI MLPDGDGRTL LKEIRTNPAT ENIPVLMISA KYTAQNIQHG EYKPNGFLPK PFDIDDLLDR IEGILAGKTY
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