Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0162 |
Symbol | |
ID | 8251247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 191456 |
End bp | 192262 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644933812 |
Product | S1/P1 nuclease |
Protein accession | YP_003090450 |
Protein GI | 255530078 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.224354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATT ATACAGTTAC TAAGGTGGGT AAGGCCCTGC TGATCCTTGC CCTTGTTGTA TATCTGCCGT TAAATGCTGC TGCCTGGGGC ATGCTGGGAC ATCGCATTGT AGGTCAGATT GCAGAAGGCT ATTTGAGCAA TAAGGCAAAA AAAGGTATAA AAGATGTGCT GGGAAATGAG AGTTTGGCAA TGGCCAGTAA CTGGGGCGAT TTTATAAAAT CGGACCCTGC TTATGATTAT CTATACAACT GGCATTTTGT AAACCTGCCG GCAGGTTTGG ATAAGCAGGG CGTTTTTGAC CAGCTGGATA AAGAAACATC ACCCAATGTA TACAATAAGA TCCCGGAAAT GGCCGCTGTG TTAAAGAACA GACAAAGCAC TGCAGAGGAG AAAAGGCTGG CCATGCGGTT ACTGATCCAT TTGGTGGGCG ACTTAAACCA GCCGATGCAT ACGGCAAGAA AGGAAGACCT CGGGGGCAAT AAAGTTTTTG TGACCTGGTT TGGTGAAAAA TCTAACCTGC ACAGGGTTTG GGATGAAGGA CTGATTGAGT ACCAGCAACT GAGCTACACA GAATACGCAA ATGCAATTAA TTATCCTTCC AACGATCAGC TGAACAGCTG GAGAAACAAT TCCTTGAAAG ATTTCGTTTA TGGATCCTAT CAGGCATGTA ACCGGATCTA TGCCGATATC AAGCCGGAGG AAAGGCTGAG TTATAAGTAT AATTTTGAAT TTGTAGGGTT GCTGAACGAA CAGCTTTTAA AGGGTGGAAT CTGTCTGGCC AATATGCTAA ACGATATTTA TAAATAG
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Protein sequence | MKNYTVTKVG KALLILALVV YLPLNAAAWG MLGHRIVGQI AEGYLSNKAK KGIKDVLGNE SLAMASNWGD FIKSDPAYDY LYNWHFVNLP AGLDKQGVFD QLDKETSPNV YNKIPEMAAV LKNRQSTAEE KRLAMRLLIH LVGDLNQPMH TARKEDLGGN KVFVTWFGEK SNLHRVWDEG LIEYQQLSYT EYANAINYPS NDQLNSWRNN SLKDFVYGSY QACNRIYADI KPEERLSYKY NFEFVGLLNE QLLKGGICLA NMLNDIYK
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