Gene Phep_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0162 
Symbol 
ID8251247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp191456 
End bp192262 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content43% 
IMG OID644933812 
ProductS1/P1 nuclease 
Protein accessionYP_003090450 
Protein GI255530078 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.224354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATT ATACAGTTAC TAAGGTGGGT AAGGCCCTGC TGATCCTTGC CCTTGTTGTA 
TATCTGCCGT TAAATGCTGC TGCCTGGGGC ATGCTGGGAC ATCGCATTGT AGGTCAGATT
GCAGAAGGCT ATTTGAGCAA TAAGGCAAAA AAAGGTATAA AAGATGTGCT GGGAAATGAG
AGTTTGGCAA TGGCCAGTAA CTGGGGCGAT TTTATAAAAT CGGACCCTGC TTATGATTAT
CTATACAACT GGCATTTTGT AAACCTGCCG GCAGGTTTGG ATAAGCAGGG CGTTTTTGAC
CAGCTGGATA AAGAAACATC ACCCAATGTA TACAATAAGA TCCCGGAAAT GGCCGCTGTG
TTAAAGAACA GACAAAGCAC TGCAGAGGAG AAAAGGCTGG CCATGCGGTT ACTGATCCAT
TTGGTGGGCG ACTTAAACCA GCCGATGCAT ACGGCAAGAA AGGAAGACCT CGGGGGCAAT
AAAGTTTTTG TGACCTGGTT TGGTGAAAAA TCTAACCTGC ACAGGGTTTG GGATGAAGGA
CTGATTGAGT ACCAGCAACT GAGCTACACA GAATACGCAA ATGCAATTAA TTATCCTTCC
AACGATCAGC TGAACAGCTG GAGAAACAAT TCCTTGAAAG ATTTCGTTTA TGGATCCTAT
CAGGCATGTA ACCGGATCTA TGCCGATATC AAGCCGGAGG AAAGGCTGAG TTATAAGTAT
AATTTTGAAT TTGTAGGGTT GCTGAACGAA CAGCTTTTAA AGGGTGGAAT CTGTCTGGCC
AATATGCTAA ACGATATTTA TAAATAG
 
Protein sequence
MKNYTVTKVG KALLILALVV YLPLNAAAWG MLGHRIVGQI AEGYLSNKAK KGIKDVLGNE 
SLAMASNWGD FIKSDPAYDY LYNWHFVNLP AGLDKQGVFD QLDKETSPNV YNKIPEMAAV
LKNRQSTAEE KRLAMRLLIH LVGDLNQPMH TARKEDLGGN KVFVTWFGEK SNLHRVWDEG
LIEYQQLSYT EYANAINYPS NDQLNSWRNN SLKDFVYGSY QACNRIYADI KPEERLSYKY
NFEFVGLLNE QLLKGGICLA NMLNDIYK