Gene Phep_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0053 
Symbol 
ID8251137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp54692 
End bp55399 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content39% 
IMG OID644933702 
Producthypothetical protein 
Protein accessionYP_003090341 
Protein GI255529969 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.935944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.582705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAA CAATTAATTT AAAAACGATA TTCAAAACAT TTATAGCTGC GGTTACCTTA 
TCAGTAGTTT TTGTGGCCTG TTCAAAAGAC AGGAGTGAGC CTCAGCAGGT AGCGGGGCTT
TCTATTATCA TGGCCTATCC GGATACCACA ACTTTAGATT TTATCGTCGA TCAAACAAGG
GTAAACAATG CTAAAGGGTT GAACTTTAAC GGAAAAATTG ATTATTTAAA CCTATTTCCC
GGAAACAGAA GGCTGGGCAT CACCAAAAGA AATTCCAACA GGTTAATCAT GTCCGAGAAC
TTTAACCTGC TTTCAGGGGT TGGCTATTCT ATTTTTGTGG TAGATACCGT TAAGGATAAT
ACCAAAAGAT TTCTTTTGAC AGAGGACGAT CTGAGTGCTC CTGCTGCAGA TAAAGCAAAA
ATCCGCTTCA TCAATTTAAG CAAGGATGCC CCTGCATTGA GCCTTAGGAT ACATGGAAAA
GATGCAGACC TGTTTACCGG TAAAGCATTT TATGAGTATA CCAGCTTTTC TGCTGTTGAC
CCGGGCGAAA GTGTAACCTT TGATGTCAAC GAGGGAACAA CACTTAAAAC CAGTTTGCCG
AATGTTAAAA TAGAAAAAGG GAAAATTTAT ACCATTTACG CCAAAGGGTT TCAGGCTGCT
GCAATAGATA GCTTAAAACT GCGTGCTGCA ATTTACACAC ACAAATAA
 
Protein sequence
MKLTINLKTI FKTFIAAVTL SVVFVACSKD RSEPQQVAGL SIIMAYPDTT TLDFIVDQTR 
VNNAKGLNFN GKIDYLNLFP GNRRLGITKR NSNRLIMSEN FNLLSGVGYS IFVVDTVKDN
TKRFLLTEDD LSAPAADKAK IRFINLSKDA PALSLRIHGK DADLFTGKAF YEYTSFSAVD
PGESVTFDVN EGTTLKTSLP NVKIEKGKIY TIYAKGFQAA AIDSLKLRAA IYTHK