Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5704 |
Symbol | |
ID | 3713909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 6394353 |
End bp | 6395093 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | two component transcriptional regulator |
Protein accession | YP_351431 |
Protein GI | 77461924 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.140603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.300283 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCATG TCGATCACAT TCTGATCGTC GACGACGACC GCGAAATTCG TGAACTGGTC GGCAATTACC TGAAGAAAAA CGGCCTGCGC ACCACGGTGG TTGCCGATGG CCGCCAGATG CGCAGTTTCC TGGAAGCCAA CACCGTCGAC CTGATCGTGC TCGACATCAT GATGCCCGGC GACGATGGCC TGCTGCTGTG CCGCGAGTTA CGCTCGAGCA AACACAGGGC CACGCCGATC CTGATGCTCA CCGCGCGCAA TGATGAAACC GACCGCATCC TCGGCCTGGA AATGGGCGCC GACGACTACC TGACTAAACC GTTCGCCGCG CGCGAGCTGC TGGCGCGGAT CAATGCCGTG CTGCGTCGTA CACGGATGCT GCCGCCGAAT CTGGTGGTGA CTGAAAGCGG TCGGCTGCTG GCGTTCGGTC GCTGGCAGCT CGACACATCA GCCCGGCATC TGCTGGACAA GGACGGCACT CTAGTTGCCC TAAGTGGCGG TGAATATCGT TTGTTGCGCG TATTCCTCGA CCATCCGCAA CGGGTGCTGA GCCGCGATCA ATTGCTCAAT CTGACCCAGG GTCGCGACGC CGATCTGTTC GACCGCTCCA TCGATCTGCT GGTCAGCCGT CTGCGCCAGC GCCTGCTGGA TGACGCCCGT GAACCGGCCT ACATCAAGAC CGTACGCAGC GAAGGCTATG TGTTCTCGCT ACCGGTCGAA ATCCTTGGAG CTCCCGCATG A
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Protein sequence | MEHVDHILIV DDDREIRELV GNYLKKNGLR TTVVADGRQM RSFLEANTVD LIVLDIMMPG DDGLLLCREL RSSKHRATPI LMLTARNDET DRILGLEMGA DDYLTKPFAA RELLARINAV LRRTRMLPPN LVVTESGRLL AFGRWQLDTS ARHLLDKDGT LVALSGGEYR LLRVFLDHPQ RVLSRDQLLN LTQGRDADLF DRSIDLLVSR LRQRLLDDAR EPAYIKTVRS EGYVFSLPVE ILGAPA
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