Gene Pfl01_5704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5704 
Symbol 
ID3713909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6394353 
End bp6395093 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content61% 
IMG OID 
Producttwo component transcriptional regulator 
Protein accessionYP_351431 
Protein GI77461924 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.140603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.300283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCATG TCGATCACAT TCTGATCGTC GACGACGACC GCGAAATTCG TGAACTGGTC 
GGCAATTACC TGAAGAAAAA CGGCCTGCGC ACCACGGTGG TTGCCGATGG CCGCCAGATG
CGCAGTTTCC TGGAAGCCAA CACCGTCGAC CTGATCGTGC TCGACATCAT GATGCCCGGC
GACGATGGCC TGCTGCTGTG CCGCGAGTTA CGCTCGAGCA AACACAGGGC CACGCCGATC
CTGATGCTCA CCGCGCGCAA TGATGAAACC GACCGCATCC TCGGCCTGGA AATGGGCGCC
GACGACTACC TGACTAAACC GTTCGCCGCG CGCGAGCTGC TGGCGCGGAT CAATGCCGTG
CTGCGTCGTA CACGGATGCT GCCGCCGAAT CTGGTGGTGA CTGAAAGCGG TCGGCTGCTG
GCGTTCGGTC GCTGGCAGCT CGACACATCA GCCCGGCATC TGCTGGACAA GGACGGCACT
CTAGTTGCCC TAAGTGGCGG TGAATATCGT TTGTTGCGCG TATTCCTCGA CCATCCGCAA
CGGGTGCTGA GCCGCGATCA ATTGCTCAAT CTGACCCAGG GTCGCGACGC CGATCTGTTC
GACCGCTCCA TCGATCTGCT GGTCAGCCGT CTGCGCCAGC GCCTGCTGGA TGACGCCCGT
GAACCGGCCT ACATCAAGAC CGTACGCAGC GAAGGCTATG TGTTCTCGCT ACCGGTCGAA
ATCCTTGGAG CTCCCGCATG A
 
Protein sequence
MEHVDHILIV DDDREIRELV GNYLKKNGLR TTVVADGRQM RSFLEANTVD LIVLDIMMPG 
DDGLLLCREL RSSKHRATPI LMLTARNDET DRILGLEMGA DDYLTKPFAA RELLARINAV
LRRTRMLPPN LVVTESGRLL AFGRWQLDTS ARHLLDKDGT LVALSGGEYR LLRVFLDHPQ
RVLSRDQLLN LTQGRDADLF DRSIDLLVSR LRQRLLDDAR EPAYIKTVRS EGYVFSLPVE
ILGAPA