| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_5689 |
|---|
| Symbol | |
|---|
| ID | 3713681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 6375166 |
|---|
| End bp | 6377196 |
|---|
| Gene Length | 2031 bp |
|---|
| Protein Length | 676 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-like, FMN-binding |
|---|
| Protein accession | YP_351416 |
|---|
| Protein GI | 77461909 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.397197 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGTT CACCGTGGCA CGCTGGCGAG CAACAGTTGC AGGCCCATGT CGGCGTTGCC
GAGCGCATGG AGGAATTCGG TCGTAAGGTG ATTCGCACCT GGATGCCGGA TCAACACCGC
CAGTTCTATC AGCAATTGCC TTTCATGCTG TACGGCGCGG TGGATGCCGA AGGTCGCCCC
TGGGCCAGTG TGCTGGAGGG GGAGCCGGGC TTTGCTCACT CTCCCGAGCC GACGCAACTG
CAGTTCGCCA GTCTGCCGGC TGCCGACGAT CCGGCACAGT TACAGGCTGG CGCAGCGATC
GGTCTGCTTG GGATCGAACT GCACACCCGC CGGCGCAATC GGCTCAATGG CCACATCGAT
AATCTCGACG CGAACGGCTT CGGGCTGACG GTCGATCAGT CGTTCGGCAA CTGCCCGCAG
TACATTCAGT TGCGCCAGTT TCAGCGAGTG CCGCTGACGG ATCCGCAGAC CCGCAAAGCC
GAACACCGTG ATAGCCTCGA CGCCGCCGCC ATTGCGCTGA TTGAAAGCGC TGATACTTTC
TTCGTCGCCA GTTACGTCGA CGTCGACGGC GAGCGTTCGG TGGATGTTTC CCACCGCGGC
GGTCAGCCCG GTTTTGTGCG AATCGAGGGT AATCGCCTGA CGATCCCTGA TTTTGCCGGC
AACCTGCACT TCAACACGCT GGGCAATCTG CTGCTCAATC CCTTGGCCGG GTTGCTTTTC
ATCGACTTTT CCACAGGCGA TGTGTTGCAG CTCAGCGGTC GCACCGAGAT CATTCTTGAC
GCGCCGCAGA TCGAGGCCTT CCAGGGCGCC GAACGGTTGT GGACTTTCGA GGTGGAAAAA
CTGGTTCGGC GTCCGGCAGC GCTGGCTCTT CGCTGGCGCT TCGACGGCAT GTCACCCACC
AGCCTGCTGA CCGGTAACTG GGCCCAGGCC GATGCACGAT TGCAGGCCAA GGCATTGGGG
GACAGCTGGC GGCCATTGCG CGTGGCAAAA GTCGAAATGG AAAGCCGTCA CATCCGCTCG
ATCTATCTGG AGCCGAACGA TGGCGCAGGA CTGCCGGTGT TTCTCGCCGG GCAGCATCTG
CCGCTGCGGT TCACCCTTGA TGGCGAGGTG CACATCCGCA CCTACAGCCT GTCCGGCGCG
CCGTCGGACG ATTTTTTCCG GATCAGTGTC AAGCGCGAAG GACGGGTGTC GACGCACCTG
CATGAGCAGA TTCGCGTAGG CGATGTGCTG GAGGCGCGCT TGCCTCAAGG ACATTTCACC
GTCGCGGCAC TGGAGCGCAA GCCATTGGTG CTGCTCGCCG CCGGCGTCGG CATCACGCCG
TTGCTGTCGA TGCTGCGTGA GGTGGTGTAT CAGGGCCTGC GGACGCGACG GATTCGTCCG
ACCCTGTTTG TTCAGAGTTC CCGCAGCCTC GCCGACCAGC CGTTCCGCGC AGAGGTGGAT
CGGTTGCTGG AGGATGCCGG TGATGCCGTG AAAGTGTTGC GAGTGCTAAG TCAGCCGGAA
GACGATCTGG TAGAAGGAAA AGACTTCGAC CTGCGTGGTC GTATCGATGG CGATCTGTTG
CGCAATCTGC TGACCGACGA GGACTTCGAT CAGGTCGACT TCGTGCTCTG CGGTCCCGGC
GGTTTTACCC AGGGTATTTA CGACATCTTG CGCGAACTGA ATGTGCGGGA CGGGCAGATC
CATGCCGAAA CCTTCGGCCC TTCGACCCTC AAGCGCCAAG CCGATCCGGA CGCGATCGTG
ATGGAACAAC CGCCGGCTGC GACCACGTCG GTGCCGGTGC TGTTCGAGCG TTCGGCCAAG
GAAGCGCGCT GGCAGCCCGA CGGCGGCAGT TTGCTGGAGC TGGCGGAAAG CCGCGGCCTG
CGTCCGGAAT TCAGTTGTCG CGGTGGTTCG TGCGGCACCT GCAAGACGCG GCTGATCAGC
GGCGCGGTGA ATTATCCACA GCCTCCGGCT GAAGTACCGG AGGAAGGGCA GGTTTTGATC
TGCTGCGCGG TGCCGGCCCA GAGTGCCCAG CCGCTGGTGC TGGATCTGTA A
|
|---|
| Protein sequence | MERSPWHAGE QQLQAHVGVA ERMEEFGRKV IRTWMPDQHR QFYQQLPFML YGAVDAEGRP
WASVLEGEPG FAHSPEPTQL QFASLPAADD PAQLQAGAAI GLLGIELHTR RRNRLNGHID
NLDANGFGLT VDQSFGNCPQ YIQLRQFQRV PLTDPQTRKA EHRDSLDAAA IALIESADTF
FVASYVDVDG ERSVDVSHRG GQPGFVRIEG NRLTIPDFAG NLHFNTLGNL LLNPLAGLLF
IDFSTGDVLQ LSGRTEIILD APQIEAFQGA ERLWTFEVEK LVRRPAALAL RWRFDGMSPT
SLLTGNWAQA DARLQAKALG DSWRPLRVAK VEMESRHIRS IYLEPNDGAG LPVFLAGQHL
PLRFTLDGEV HIRTYSLSGA PSDDFFRISV KREGRVSTHL HEQIRVGDVL EARLPQGHFT
VAALERKPLV LLAAGVGITP LLSMLREVVY QGLRTRRIRP TLFVQSSRSL ADQPFRAEVD
RLLEDAGDAV KVLRVLSQPE DDLVEGKDFD LRGRIDGDLL RNLLTDEDFD QVDFVLCGPG
GFTQGIYDIL RELNVRDGQI HAETFGPSTL KRQADPDAIV MEQPPAATTS VPVLFERSAK
EARWQPDGGS LLELAESRGL RPEFSCRGGS CGTCKTRLIS GAVNYPQPPA EVPEEGQVLI
CCAVPAQSAQ PLVLDL
|
|---|
| |