Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5442 |
Symbol | |
ID | 3714346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 6107120 |
End bp | 6109840 |
Gene Length | 2721 bp |
Protein Length | 906 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | ABC transporter-like |
Protein accession | YP_351170 |
Protein GI | 77461663 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0350358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGCG TCGCGGTTCA CGCGAACGCC ATCACTCACC GCTATGGCGA GCGGCAAGCG CTGGATGGCA TCGCGTTCGG CCTGCCGGCC GGTACCCGCT GCGGCTTGAT TGGCCCTGAC GGAGCGGGCA AATCCAGTCT GTTGGGGCTG ATTGCGGGCG TGAAAGCCCT CCAGCAAGGG CAACTGGAAG TGCTTGGCGG TCCGATCCAG GATCGCAGCC ACCGCAACAC GCTGTACGCG CGTATCGCTT TCATGCCGCA GGGATTGGGC GGCAACCTGT ACCCGGAACT GTCGATCCGC GAGAACGTGC ATTTTTTCGC CACCTTGTTC GGCCTCTCCG CCGACGAAAG CGCGCAGCGC CTGCACAACC TGTTGCTCGC CACTGATCTG CTGAGGTTCG CCGATCGACC GGCCGGCAAA CTCTCCGGTG GCATGAAACA GAAACTCGGA CTGTGTTGCG CACTGATTCA CGAACCGGAT CTGTTGATCC TCGACGAGCC GACCACCGGC GTCGATCCGC TCTCGCGCCG CAAGTTCTGG GAATTGATCG ACGATGTTCG GCGCCAACGA CCGCAGCTGA CCCTGCTGGT CGCCACGGCC TACATGGAGG AAGCTGAACA ATTCGAGCAT TGCCTGATGC TCGACGGCGG CCGGATGATC GCCACCGGTC TGAGCCGCGA ACTGGCTGCT GTCACGCCCA GCGGCAAGCT TGATGACGCC TTCACTCATT TTCAGGGTGA AAGCCGTCAC GCCACTCAAC CGCTGCACAT CCCGCCTTAC ACCGGCAACA CCGATATTGC CATCGAGGCT CACGACCTGA CGTTGCGTTT CGGCAACTTT ACGGCTGTGG ATCGCGTCAG CTTCGCCATC GGGCGAGGCG AGATTTTCGG TTTCCTTGGC TCCAATGGCT GCGGCAAGAC CACCACAATG AAAGTCCTGA CCGGACTGAT GCCCGCCAGC GAAGGTAACG CAACGCTGCT GGGCAATCCG GTGGATGCGA AGGATCTGGC CACGCGCAAA CGGGTCGGAT TCATGTCTCA GAGCTTTTCG CTGTATGGCG AACTCAGCGT GCGGCAAAAC CTTGAACTGC ACGCACGCCT GTTCGATTTG CCGAAAACCG AGAGCGCCCA GCGCATCGAC GCGCTGATTC AACGCTTCGA TCTGCACGGT GTCGCCAATC AATCGTCCGG GGCCTTGCCT CTGGGAATAC GCCAGCGCCT GTCACTGGCG GTCGCGGTCT TGCACAGCCC GGAAGTGCTG ATTCTGGATG AGCCGACCTC TGGAGTTGAT CCCGCGGCGC GAGACGATTT CTGGCGCCTG TTGATCGAAC TGTCCCGTGA TCAAGGCGTG ACCATTTTCC TTTCCACCCA TTTCATGAAC GAAGCTCAGC GTTGCGACCG CATTTCCCTG ATGCACGCGG GCAAAGTGCT GGCCTGTGAC ACGCCGACGG CACTGCAACA ACAGTTTGGC GGCAAGTCCC TGGAGGCGGC GTTCGTGACC TGCCTTGAAC AGGCTCAGGG TAGTGCCGAA ACCGCCCCGC CTCCCGCGCC GTCACCGGCC CCGAAGGCGC CGGCCAGCTC CGTCAGGGAG CGGGTTTTCA GTTTCGGTCG TCTGACGGCA GTGGCTCGCC GCGAAGGCAA AGAACTGATC CGCGACAAAG TGCGCATGGC GTTTGCACTG CTGGGTGCCA TTTTCATGAT GGTGATTTTT GGCTTCGGGA TTTCCCTGGA TGTAGAGAAC CTGGCCTTCG CCGTGTATGA CCAGGATCAA ACGCCACAAA GCCGCGCCTA TCTGGAGGCC TTCCGCGGCT CCCGCTATTT CGCCGAACAG CCGCCCATCG AAGATGCACA GGCTCTGCAC CGCCGGCTGC AACGTTCGGA AATCAAACTG GCGCTGGAGA TCCCGCCCGG ATTCGGCCGC GACCTGTACG CCGGACATCG GCCGGAAGTC GCGGCGTGGC TGGATGGCGG CATGCCCTTT CGCGCCGAGA CCAGTCGCAA CTACGTCGAG GCCGTCCATC TGGCCAATCT TGAGCAACTT GCCGAACAAA GCAGCCCGGC ATTGACCCTG TCAGCCCCAG CCACGCTGCA GACCCGCTTT CGCTATAACC AGGATGTGGT CAGCGTCAAT GCCATCGGCC CCGGCGTGAT GGCGCTGATT CTGGCCTTCA TTCCGGCGAT GCTGACTGCG CTCGGCATCG TGCGCGAGAA AGAGCTGGGC TCGATCACCA ATTTCTACGC CACGCCCCTG ACCCGCCTCG AATTTCTGCT GGGCAAACAA CTACCCTATC TGCTGGTCAG CCTGGTCAAC CTCGCCGTGC TCGTGGCGAT GAATCGCTGG CTGTTCGGCG TGCCCTTCAA GGGCAGCCTG CCGACCCTTG CGTTCGGCGG GCTGCTGTAT GTACTGGCCA CTACCAGCAT GGGCCTGCTG ATTTCAGCGT TCACCCGAAC GCAGATCGCG GCGATCCTCG GCACCATGAT CATCACCAGC CTGCCGACCA TCCAGTTCTC GGGTCTGATC GTGCCGCGTT CTTCGCTGGA AGGAGCCGCC GCCGTGATGG GCTTGCTGTT TCCGGCCGGT CACTTCCTCG ACATCGCCGT AGGAACGTTC ACCAAAGCTC TGGACCTGCG TCAACTCTGG CCACAATGTC TGGCGCTGGG CGGCTTTTTT ATCGGGTTCA CCGGCTTGAG CCTGATCATG CTGAAGAAGC AGGAGGCCTG A
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Protein sequence | MNSVAVHANA ITHRYGERQA LDGIAFGLPA GTRCGLIGPD GAGKSSLLGL IAGVKALQQG QLEVLGGPIQ DRSHRNTLYA RIAFMPQGLG GNLYPELSIR ENVHFFATLF GLSADESAQR LHNLLLATDL LRFADRPAGK LSGGMKQKLG LCCALIHEPD LLILDEPTTG VDPLSRRKFW ELIDDVRRQR PQLTLLVATA YMEEAEQFEH CLMLDGGRMI ATGLSRELAA VTPSGKLDDA FTHFQGESRH ATQPLHIPPY TGNTDIAIEA HDLTLRFGNF TAVDRVSFAI GRGEIFGFLG SNGCGKTTTM KVLTGLMPAS EGNATLLGNP VDAKDLATRK RVGFMSQSFS LYGELSVRQN LELHARLFDL PKTESAQRID ALIQRFDLHG VANQSSGALP LGIRQRLSLA VAVLHSPEVL ILDEPTSGVD PAARDDFWRL LIELSRDQGV TIFLSTHFMN EAQRCDRISL MHAGKVLACD TPTALQQQFG GKSLEAAFVT CLEQAQGSAE TAPPPAPSPA PKAPASSVRE RVFSFGRLTA VARREGKELI RDKVRMAFAL LGAIFMMVIF GFGISLDVEN LAFAVYDQDQ TPQSRAYLEA FRGSRYFAEQ PPIEDAQALH RRLQRSEIKL ALEIPPGFGR DLYAGHRPEV AAWLDGGMPF RAETSRNYVE AVHLANLEQL AEQSSPALTL SAPATLQTRF RYNQDVVSVN AIGPGVMALI LAFIPAMLTA LGIVREKELG SITNFYATPL TRLEFLLGKQ LPYLLVSLVN LAVLVAMNRW LFGVPFKGSL PTLAFGGLLY VLATTSMGLL ISAFTRTQIA AILGTMIITS LPTIQFSGLI VPRSSLEGAA AVMGLLFPAG HFLDIAVGTF TKALDLRQLW PQCLALGGFF IGFTGLSLIM LKKQEA
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