Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_5168 |
Symbol | |
ID | 3716934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5811464 |
End bp | 5812792 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | diguanylate cyclase |
Protein accession | YP_350896 |
Protein GI | 77461389 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.160998 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATCTC TTTGCCATGA CGGGTCGGAG CTTTTACCCT TGCCGCGTTC TTCCGCTGTA CGTTTCAGTC ATTTCCTGCC GTCACTGCTG TTGTTGCTCG CGGGGTTGGC GGCTGCGTAC GTCAAAGACC TCAACGTGTT CTTCACCTCG CTGTTTAACG TGTTGCCGAC ATTGGTGCTG CTGTTGGGCG GTTCGTACTG TGCGGTTTAC CGACGCCAGC GCGAGCTGTT TCTGATGGTC ACGGTGTACA TCGCCTACTT CCTGCTCGAC ACCCAGACTG ACTATTACCG CGACAACGGC AAGGTGCGCG AAGATGCGGC CGTGGTGTTC CACTTGGTCT GTCTGTTGCT GCCGTTGCTG TTCGGTCTGT TCGCCGCATG GCAGGAACGC ACGCATCTGT TTCAGGACAT GATCGCGCGC TTCGCCGTGC TGCTGGCCTT TGGCAGCGTG GCGCTGGGGC TCGAGCAAAG CTACCCGCAG GCCTTGCTGA TGTGGCTTTC CGAGATCCGC TGGCCGGCGC TGCACGGCGC GTGGATGAGC CTGATCCAGT TGTCGTATCC GGTGTTTATC TCGGCGTTCC TGCTTCTGGC CTGGCAATAC TGGCGCAACC CGCGTCCGCT GCACGCGGCG CAACTGGTGG GGTTGCTCGG GGTGTTCTGG ATGCTGCCGA AAACCTTCAT CCTGCCGTTC ACCCTGAACA TCATGTGCAG CCAGGTCATG CTGATGATTG CGGCAGCGGT AGCGCACGAG GCGTATCAAA TGGCCTTCCG CGACGAACTC ACCGGTTTGC CGGGACGCCG CGCACTCAAC GAGCGTATGC AGCGTCTGGG TCGCAACTAT GTGCTGGCGA TGAGCGACGT CGATCATTTC AAGAAATTCA ACGACACCCA CGGCCACGAC GTGGGGGATC AGGTGTTGCG TCTGGTCGCC AGCAAGCTGT CCAAAATCAG CGGCGGCGGT AGGGCGTATC GCTACGGTGG CGAGGAATTC GCCCTGGTGT TTGCGGGCAA GACCCTCGAA GAGTGCATGC CGCACCTGGA AGTCATCCGT GAGTCGATTG CGTCCTACAA CATTCAGCTG CGTAATCAGG AAAGCCGCCC GCAAGATGAT CAGCAGGGGC GTCAGCGTCG CTCGGGTTCG GGGGCGTCCA GCGTGTCGGT CACGGTCAGC ATCGGCGTGG CCGAACGCCT GGAACAACGT ACTCCGGAAG AGGTGCTGAA ATCCGCTGAC CAGGCGCTCT ACAGTGCCAA GGGCGCAGGC CGAAACTGCG TGATGGCGTT CGGTCAGAAC CGCCGTGGCG CGGTGCGCAT GGACAGCGCC GCAGGTTGA
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Protein sequence | MPSLCHDGSE LLPLPRSSAV RFSHFLPSLL LLLAGLAAAY VKDLNVFFTS LFNVLPTLVL LLGGSYCAVY RRQRELFLMV TVYIAYFLLD TQTDYYRDNG KVREDAAVVF HLVCLLLPLL FGLFAAWQER THLFQDMIAR FAVLLAFGSV ALGLEQSYPQ ALLMWLSEIR WPALHGAWMS LIQLSYPVFI SAFLLLAWQY WRNPRPLHAA QLVGLLGVFW MLPKTFILPF TLNIMCSQVM LMIAAAVAHE AYQMAFRDEL TGLPGRRALN ERMQRLGRNY VLAMSDVDHF KKFNDTHGHD VGDQVLRLVA SKLSKISGGG RAYRYGGEEF ALVFAGKTLE ECMPHLEVIR ESIASYNIQL RNQESRPQDD QQGRQRRSGS GASSVSVTVS IGVAERLEQR TPEEVLKSAD QALYSAKGAG RNCVMAFGQN RRGAVRMDSA AG
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