Gene Pfl01_4738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4738 
Symbol 
ID3715159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5343158 
End bp5343940 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content62% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_350466 
Protein GI77460959 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.9226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.284155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGTA CAGCTCCACG GCGTTATTGG CTGACCGGTG CCAGCAGTGG CATCGGTGCA 
GCATTGGCAG AAGAAATCCT CAAGACCGGT GCACATCTGG CGGTCAGTTC CCGTCAGGTC
GCGCCGCTCA AAGTGCTGTC GCAACGTTAT CCGGGACAGG TACTGCTGGT GCCCGGCGAT
CTGACCAACA GTCAGACCGT GCGCGAAATC GGCGAACAGA TCGCAGCGGA CTGGGGCTCG
CTGGACTCGG TGATCCTCAA CGCCGGCACC TGCGAATACG TCGACGCCCG TCAATTCGAC
GCGTCGATCG TCGAACACGT AGTGCGCACC AACCTGCTCG CCAGCAGCTA TTGCATCGAA
GCCGCCCTGC CGTTGCTGCG CAAAGGTACG GCACCGCATC TGGTGGGGAT GGCCAGCTCG
GTGACCTATG TGCCGTTGCC CCGCGCCGAA GCCTATGGCG CGTCGAAGGC CGGGCTGCGC
TATCTGTTCG AATCCCTGCG CATTGACCTG GCGGCCGAAG GCATTGAAGT CACGGTAATC
AGTCCAGGCT TCGTCGACAC GCCCCTGACC GCCAAAAATG ACTTCCCGAT GCCGCTCAGT
TGGCCTGTGG ATAAAGCCGC GCGGCATATC TTCGCCAAGC TGAAGGACCG GCCGCTTGAG
ATCGCTTTCC CGGCGCTGTT CATCGCGGCC CTGTGGCCAC TGTCGAAAAT GCCCGCGCGG
GTACAACTGG CGATCGGCAA GCGCATGGTG CGCAGCAACC CGCCGCTCAA GGATGCAACA
TGA
 
Protein sequence
MSRTAPRRYW LTGASSGIGA ALAEEILKTG AHLAVSSRQV APLKVLSQRY PGQVLLVPGD 
LTNSQTVREI GEQIAADWGS LDSVILNAGT CEYVDARQFD ASIVEHVVRT NLLASSYCIE
AALPLLRKGT APHLVGMASS VTYVPLPRAE AYGASKAGLR YLFESLRIDL AAEGIEVTVI
SPGFVDTPLT AKNDFPMPLS WPVDKAARHI FAKLKDRPLE IAFPALFIAA LWPLSKMPAR
VQLAIGKRMV RSNPPLKDAT