Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4738 |
Symbol | |
ID | 3715159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5343158 |
End bp | 5343940 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_350466 |
Protein GI | 77460959 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.9226 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.284155 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGTA CAGCTCCACG GCGTTATTGG CTGACCGGTG CCAGCAGTGG CATCGGTGCA GCATTGGCAG AAGAAATCCT CAAGACCGGT GCACATCTGG CGGTCAGTTC CCGTCAGGTC GCGCCGCTCA AAGTGCTGTC GCAACGTTAT CCGGGACAGG TACTGCTGGT GCCCGGCGAT CTGACCAACA GTCAGACCGT GCGCGAAATC GGCGAACAGA TCGCAGCGGA CTGGGGCTCG CTGGACTCGG TGATCCTCAA CGCCGGCACC TGCGAATACG TCGACGCCCG TCAATTCGAC GCGTCGATCG TCGAACACGT AGTGCGCACC AACCTGCTCG CCAGCAGCTA TTGCATCGAA GCCGCCCTGC CGTTGCTGCG CAAAGGTACG GCACCGCATC TGGTGGGGAT GGCCAGCTCG GTGACCTATG TGCCGTTGCC CCGCGCCGAA GCCTATGGCG CGTCGAAGGC CGGGCTGCGC TATCTGTTCG AATCCCTGCG CATTGACCTG GCGGCCGAAG GCATTGAAGT CACGGTAATC AGTCCAGGCT TCGTCGACAC GCCCCTGACC GCCAAAAATG ACTTCCCGAT GCCGCTCAGT TGGCCTGTGG ATAAAGCCGC GCGGCATATC TTCGCCAAGC TGAAGGACCG GCCGCTTGAG ATCGCTTTCC CGGCGCTGTT CATCGCGGCC CTGTGGCCAC TGTCGAAAAT GCCCGCGCGG GTACAACTGG CGATCGGCAA GCGCATGGTG CGCAGCAACC CGCCGCTCAA GGATGCAACA TGA
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Protein sequence | MSRTAPRRYW LTGASSGIGA ALAEEILKTG AHLAVSSRQV APLKVLSQRY PGQVLLVPGD LTNSQTVREI GEQIAADWGS LDSVILNAGT CEYVDARQFD ASIVEHVVRT NLLASSYCIE AALPLLRKGT APHLVGMASS VTYVPLPRAE AYGASKAGLR YLFESLRIDL AAEGIEVTVI SPGFVDTPLT AKNDFPMPLS WPVDKAARHI FAKLKDRPLE IAFPALFIAA LWPLSKMPAR VQLAIGKRMV RSNPPLKDAT
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