Gene Pfl01_4531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4531 
Symbol 
ID3717900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp5104775 
End bp5105626 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content60% 
IMG OID 
ProductAquaporin 
Protein accessionYP_350259 
Protein GI77460752 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.174053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.147352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACTG CGTTACAGCA ACCTTCGCTC TCGAGCCAGT GCCTGGCCGA GTTTCTGGGT 
ACTGCACTCC TGATCTTTTT CGGCACGGGT TGTGTCGCCG CGCTCAAGGT CGCGGGCGCC
AGCTTCGGTC TCTGGGAAAT CAGCATCATC TGGGGCGTCG GCGTCAGCAT GGCGATCTAC
CTCACCGCCG GCGTTTCCGG CGCGCACCTG AACCCTGCCG TCAGTATCGC CCTGAGCATT
TTCGCCGACT TCGAAAAGCG CAAACTGCCG TTCTACATTC TGGCCCAGGT CGCCGGCGCC
TTCTGCGGCG CGCTGTTGGT CTACACGCTG TACAGCAACC TGTTCTTCGA TTACGAACAA
ACTCACCATA TGGTTCGCGG CACTGAAGCC AGCCTCGAAC TGGCATCGGT GTTCTCCACC
TTCCCGAACC CTGCGCTGTC GACTGCGCAA GCGTTCTTGG TCGAGGTGAT CATCACTGCG
ATTCTGATGG GCGTGATCAT GTCCCTGACC GACGACAACA ACGGCCTGCC GAAAGGCCCG
CTGGCGCCAC TGCTGATCGG TCTGCTGATT GCCGTGATTG GCAGCTCGAT GGGCCCGCTG
ACCGGTTTCG CGATGAACCC GGCACGGGAC TTCGGCCCGA AACTGATGAC TTTCTTCGCC
GGCTGGGGTG AAATTTCCTT CACCGGCGCA CGTGAAATCC CGTACTTCCT GATTCCGATT
TTTGCACCGA TTGTCGGTGC CTGCCTCGGC GCTGCCGGGT ATCGCGGGCT GATTGCCCGT
CACCTGACCG GCGCCACACC TGCTACAAAG GATGCAGAAC CGGCCATTGA CGGCAAACCA
AGAACTTCTT GA
 
Protein sequence
MTTALQQPSL SSQCLAEFLG TALLIFFGTG CVAALKVAGA SFGLWEISII WGVGVSMAIY 
LTAGVSGAHL NPAVSIALSI FADFEKRKLP FYILAQVAGA FCGALLVYTL YSNLFFDYEQ
THHMVRGTEA SLELASVFST FPNPALSTAQ AFLVEVIITA ILMGVIMSLT DDNNGLPKGP
LAPLLIGLLI AVIGSSMGPL TGFAMNPARD FGPKLMTFFA GWGEISFTGA REIPYFLIPI
FAPIVGACLG AAGYRGLIAR HLTGATPATK DAEPAIDGKP RTS