Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4531 |
Symbol | |
ID | 3717900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 5104775 |
End bp | 5105626 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | Aquaporin |
Protein accession | YP_350259 |
Protein GI | 77460752 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.174053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.147352 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACTG CGTTACAGCA ACCTTCGCTC TCGAGCCAGT GCCTGGCCGA GTTTCTGGGT ACTGCACTCC TGATCTTTTT CGGCACGGGT TGTGTCGCCG CGCTCAAGGT CGCGGGCGCC AGCTTCGGTC TCTGGGAAAT CAGCATCATC TGGGGCGTCG GCGTCAGCAT GGCGATCTAC CTCACCGCCG GCGTTTCCGG CGCGCACCTG AACCCTGCCG TCAGTATCGC CCTGAGCATT TTCGCCGACT TCGAAAAGCG CAAACTGCCG TTCTACATTC TGGCCCAGGT CGCCGGCGCC TTCTGCGGCG CGCTGTTGGT CTACACGCTG TACAGCAACC TGTTCTTCGA TTACGAACAA ACTCACCATA TGGTTCGCGG CACTGAAGCC AGCCTCGAAC TGGCATCGGT GTTCTCCACC TTCCCGAACC CTGCGCTGTC GACTGCGCAA GCGTTCTTGG TCGAGGTGAT CATCACTGCG ATTCTGATGG GCGTGATCAT GTCCCTGACC GACGACAACA ACGGCCTGCC GAAAGGCCCG CTGGCGCCAC TGCTGATCGG TCTGCTGATT GCCGTGATTG GCAGCTCGAT GGGCCCGCTG ACCGGTTTCG CGATGAACCC GGCACGGGAC TTCGGCCCGA AACTGATGAC TTTCTTCGCC GGCTGGGGTG AAATTTCCTT CACCGGCGCA CGTGAAATCC CGTACTTCCT GATTCCGATT TTTGCACCGA TTGTCGGTGC CTGCCTCGGC GCTGCCGGGT ATCGCGGGCT GATTGCCCGT CACCTGACCG GCGCCACACC TGCTACAAAG GATGCAGAAC CGGCCATTGA CGGCAAACCA AGAACTTCTT GA
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Protein sequence | MTTALQQPSL SSQCLAEFLG TALLIFFGTG CVAALKVAGA SFGLWEISII WGVGVSMAIY LTAGVSGAHL NPAVSIALSI FADFEKRKLP FYILAQVAGA FCGALLVYTL YSNLFFDYEQ THHMVRGTEA SLELASVFST FPNPALSTAQ AFLVEVIITA ILMGVIMSLT DDNNGLPKGP LAPLLIGLLI AVIGSSMGPL TGFAMNPARD FGPKLMTFFA GWGEISFTGA REIPYFLIPI FAPIVGACLG AAGYRGLIAR HLTGATPATK DAEPAIDGKP RTS
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