Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4498 |
Symbol | |
ID | 3717757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 5073156 |
End bp | 5073839 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | two component transcriptional regulator |
Protein accession | YP_350226 |
Protein GI | 77460719 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000234919 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGAATTC TATTGGTCGA AGACAACCGC GATATCCTGG CCAATCTGGC CGATTACCTG GGGCTCAAAG GCTACACCGT CGATTGCGCC CAGGACGGTC TGTCGGGCCT GCATCTGGCC GCCACCGAGC ATTACGACCT GATCGTGCTC GACATCATGC TGCCGGGCAT CGACGGCTAC ACCCTGTGCA AGCGCTTGCG CGAAGACGCC CGTCGCGATA CGCCGGTGAT CATGCTCACC GCCCGCGATC AGCTCGACGA TCGCCTGCAG GGCTTCAAGT CCGGGGCCGA CGATTATCTG GTCAAGCCGT TCGCGCTGTC GGAACTGGCG GCGCGGGTCG AAGCGGTGAT GCGTCGCACC CAGGGCGGCG GTCGCCGGGC CCTGCAGGTC GGCGATCTGA GCTACGACCT CGATACCCTA GAAGTGACCC GCGAAGGCAA ATTGCTCAAG CTCAACCCGG TCGGCCTCAA GCTGCTGGCA GTGCTGATGC AAAAGAGCCC GCATGTCCTG CGTCGGGAAA TTCTCGAAGA AGCGCTGTGG GGCGATGACT GCCCGGACAG CGACAGCCTG CGCAGCCATG TCCACCAGTT GCGCCAGGTG ATCGACAAAC CGTTCGCCAA GCCATTGCTG CACACCGTGC ACGGCGTGGG ATACCGCTTG GCCGAGGGCC GCGATGGAGT TTAA
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Protein sequence | MRILLVEDNR DILANLADYL GLKGYTVDCA QDGLSGLHLA ATEHYDLIVL DIMLPGIDGY TLCKRLREDA RRDTPVIMLT ARDQLDDRLQ GFKSGADDYL VKPFALSELA ARVEAVMRRT QGGGRRALQV GDLSYDLDTL EVTREGKLLK LNPVGLKLLA VLMQKSPHVL RREILEEALW GDDCPDSDSL RSHVHQLRQV IDKPFAKPLL HTVHGVGYRL AEGRDGV
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