Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4436 |
Symbol | purU |
ID | 3713475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4995915 |
End bp | 4996763 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | formyltetrahydrofolate deformylase |
Protein accession | YP_350164 |
Protein GI | 77460657 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.00849533 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCACTT TTCGGCTGGT GATTTCTTGC CCGGACCGCG TTGGCATCGT TGCCAAAGTC AGTAACTTTC TGGCGGCCCA CAATGGCTGG ATCACCGAAG CGAGCCACCA CTCGGATAAC CAGGTCGGCT GGTTCTTCAT GCGTCACGAA ATCCGTGCCG ATTCCCTGCC TTTTGGTATC GAGGTGTTGC GCGAGAAGTT TGCACCGATC GCCGAAGAGT TCTCGATGGA CTGGCGCATC ACCGACACCG AGCAGAAAAA ACGCGTGGTG CTGATGGCCA GCCGCGAATC CCACTGCCTG GCCGACCTGC TGCACCGCTG GCACAGCGAC GAGCTCGATT GCGAGATCTC CTGCGTGATT TCCAACCACG ACGACCTGCG CAGCATGGTC GAGTGGCACG GCATTCCTTA TTACCACGTG CCGGTCAATC CGCAGGACAA GCAACCGGCC TTCGATGAAG TGTCGCGCCT GGTCAAGCAG CACGACGCCG AAGTCGTGGT GCTGGCGCGC TACATGCAGA TCCTGCCGCC GGACATGTGC CGCGAATACG CGCACAAGGT CATCAACATT CACCACAGCT TCCTGCCGTC GTTCGTCGGT GCCAAGCCGT ACCACCAGGC TTCGATGCGC GGCGTGAAGC TGATCGGTGC GACTTGCCAT TACGTGACCG AAGAGCTGGA CGCCGGCCCG ATCATCGAGC AGGACGTGGT ACGTGTCAGC CACAGCGACA GCATCGAAGA CATGGTGCGT TTCGGCCGTG ACGTCGAGAA GATGGTGCTG GCCCGTGGCC TGCGCTATCA CCTGGAAGAC CGCGTGCTGG TGCACGGCAA CAAGACCGTG GTGTTCTGA
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Protein sequence | MRTFRLVISC PDRVGIVAKV SNFLAAHNGW ITEASHHSDN QVGWFFMRHE IRADSLPFGI EVLREKFAPI AEEFSMDWRI TDTEQKKRVV LMASRESHCL ADLLHRWHSD ELDCEISCVI SNHDDLRSMV EWHGIPYYHV PVNPQDKQPA FDEVSRLVKQ HDAEVVVLAR YMQILPPDMC REYAHKVINI HHSFLPSFVG AKPYHQASMR GVKLIGATCH YVTEELDAGP IIEQDVVRVS HSDSIEDMVR FGRDVEKMVL ARGLRYHLED RVLVHGNKTV VF
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