| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4138 |
|---|
| Symbol | |
|---|
| ID | 3712620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4676637 |
|---|
| End bp | 4677350 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_349866 |
|---|
| Protein GI | 77460359 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.00689638 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAGAC AGGTACGATT TGACAAGAAA CAACGGGTGG TCGACGAACT CGTCCGACGC
ATCGAAAGCG GCCTCATGGA GGACGGCTTT CTGTTGCCCG GCGAGCATCA GTTGGCTCAG
GAATTCAACG TCAGCCGAGG CACGTTGCGC GAAGCGCTGG CCGAACTGAA GCGGCGCAAT
TACATCGCCA CGCAAAGCGG GGTCGGTTCC ATCGTCACGT TTGACGGGGT GGTACTCGAC
CAGCGCAGCG GCTGGGCCCA GGCCCTGGCC GACAGCGGGG CGCTGATCAA TACCGACGTT
TTGCGCCTGG AAGCCGTGAC CCGCGAGGAT CTGTTGCCGC GTTTCGGCTC CGATCAATTC
ATTCTTCTCG AACGTCGCCG CCGTTCCAAC GATGGCACGG CGGTGTCCCT TGAACGCTCT
CTGATGCCCG CCAGCGGAGG CCTGGAAAGC CTGCCGCGAG TGGGCCTGAT CGATAACTCG
CTGACCATCA CCCTGGCCGC CTACGGCTAC ATCGGCGAGC GCGGCGATCA GTGGATCGGT
GCCGAACCGC TCAACGCCGT GGATGCCAAA CTGCTCGGCC GTCCCGAAGG CACGGTATTC
CTCAAGGCGC TGCGCACCAC GTATGACCGG CAAAACCGTT TCATGGAACA GGTCGAAAGC
CTGCTCGACC CGGTGCATTT CCGGCTGCAC CTGCAATTTG GAGAATCGAA ATGA
|
|---|
| Protein sequence | MIRQVRFDKK QRVVDELVRR IESGLMEDGF LLPGEHQLAQ EFNVSRGTLR EALAELKRRN
YIATQSGVGS IVTFDGVVLD QRSGWAQALA DSGALINTDV LRLEAVTRED LLPRFGSDQF
ILLERRRRSN DGTAVSLERS LMPASGGLES LPRVGLIDNS LTITLAAYGY IGERGDQWIG
AEPLNAVDAK LLGRPEGTVF LKALRTTYDR QNRFMEQVES LLDPVHFRLH LQFGESK
|
|---|
| |