Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4083 |
Symbol | |
ID | 3712328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4614805 |
End bp | 4615545 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | short chain dehydrogenase |
Protein accession | YP_349811 |
Protein GI | 77460304 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.391178 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGATT ACTCCGCTCG CCCCGAATTG CTCAAGGATC GGATCATTCT GGTCACCGGT GCCGGGCGCG GCATCGGCGC GGCTGCCGCC AAGACCTACG CCGCCCACGG CGCGACCGTA TTGCTGCTGG GCAAGACCGA AGCCAACCTG ACCGAAGTCT ACGACGAGAT CGAAGCAGCC GGGCATCCAC AGCCCGCCGT GATCCCGTTC AACCTCGAAA CCGCCCTGCC CCATCAATAC GATGAGCTGG CGGCGATGAT CGAAACCGAG TTCGGCCACC TCGACGGTCT GCTGCACAAC GCCTCGATCA TCGGCCCGCG CACGCCGATC GAGCAGTTGT CCGGTGAAAA CTTCATGCGT GTCATGCAGG TCAACGTCAA CGCGATGTTC ATGCTCACCA GCACGCTGTT GCCACTGCTC AAACTTTCGC AGGATGCCTC GGTGGTGTTC ACCTCCAGCA GCGTCGGGCG CAAGGGTCGT GCTTACTGGG GCGCCTATGG CGTATCGAAG TTCGCCACTG AAGGCCTGAT GCAAACACTG GCCGACGAAG TCGAAAACGT CGCTCCGGTA CGCTCCAACA GCATCAATCC GGGCGCCACT CGCACCAGCA TGCGTGCGCA GGCTTACCCG GGCGAAAACC CGCTGAATAA CCCGACACCG GAAGAGATCA TGCCGGTCTA CCTGTACCTG ATGGGCCCGG ACAGCACCGG TATCAATGGC CAGGCCTTCA ACGCCCAGTA G
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Protein sequence | MFDYSARPEL LKDRIILVTG AGRGIGAAAA KTYAAHGATV LLLGKTEANL TEVYDEIEAA GHPQPAVIPF NLETALPHQY DELAAMIETE FGHLDGLLHN ASIIGPRTPI EQLSGENFMR VMQVNVNAMF MLTSTLLPLL KLSQDASVVF TSSSVGRKGR AYWGAYGVSK FATEGLMQTL ADEVENVAPV RSNSINPGAT RTSMRAQAYP GENPLNNPTP EEIMPVYLYL MGPDSTGING QAFNAQ
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