Gene Pfl01_4083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4083 
Symbol 
ID3712328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4614805 
End bp4615545 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content61% 
IMG OID 
Productshort chain dehydrogenase 
Protein accessionYP_349811 
Protein GI77460304 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.391178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATT ACTCCGCTCG CCCCGAATTG CTCAAGGATC GGATCATTCT GGTCACCGGT 
GCCGGGCGCG GCATCGGCGC GGCTGCCGCC AAGACCTACG CCGCCCACGG CGCGACCGTA
TTGCTGCTGG GCAAGACCGA AGCCAACCTG ACCGAAGTCT ACGACGAGAT CGAAGCAGCC
GGGCATCCAC AGCCCGCCGT GATCCCGTTC AACCTCGAAA CCGCCCTGCC CCATCAATAC
GATGAGCTGG CGGCGATGAT CGAAACCGAG TTCGGCCACC TCGACGGTCT GCTGCACAAC
GCCTCGATCA TCGGCCCGCG CACGCCGATC GAGCAGTTGT CCGGTGAAAA CTTCATGCGT
GTCATGCAGG TCAACGTCAA CGCGATGTTC ATGCTCACCA GCACGCTGTT GCCACTGCTC
AAACTTTCGC AGGATGCCTC GGTGGTGTTC ACCTCCAGCA GCGTCGGGCG CAAGGGTCGT
GCTTACTGGG GCGCCTATGG CGTATCGAAG TTCGCCACTG AAGGCCTGAT GCAAACACTG
GCCGACGAAG TCGAAAACGT CGCTCCGGTA CGCTCCAACA GCATCAATCC GGGCGCCACT
CGCACCAGCA TGCGTGCGCA GGCTTACCCG GGCGAAAACC CGCTGAATAA CCCGACACCG
GAAGAGATCA TGCCGGTCTA CCTGTACCTG ATGGGCCCGG ACAGCACCGG TATCAATGGC
CAGGCCTTCA ACGCCCAGTA G
 
Protein sequence
MFDYSARPEL LKDRIILVTG AGRGIGAAAA KTYAAHGATV LLLGKTEANL TEVYDEIEAA 
GHPQPAVIPF NLETALPHQY DELAAMIETE FGHLDGLLHN ASIIGPRTPI EQLSGENFMR
VMQVNVNAMF MLTSTLLPLL KLSQDASVVF TSSSVGRKGR AYWGAYGVSK FATEGLMQTL
ADEVENVAPV RSNSINPGAT RTSMRAQAYP GENPLNNPTP EEIMPVYLYL MGPDSTGING
QAFNAQ