| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3942 |
|---|
| Symbol | |
|---|
| ID | 3715246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4468378 |
|---|
| End bp | 4469391 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_349670 |
|---|
| Protein GI | 77460163 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.291769 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAATC TGAATGACCT GACTGCCCTG GCCCTGCCTT CGGGCAGCCA ACTGGTAGCC
GATGCCACCG AAAGCCGTCT GAGCCTGAGC CTGGAAGGGC AACCGCTGAT TCGCCTGCGC
CTTGATCGTG AAGGTCAGGG GCCGATCCAG ATCGATGAAC GCTACGCACT GCCGCCGGGC
CAGGCGCTGT GGGCAGCCTG TTATTGGCTG TTTGCCCGGG ATCCGGCGTG TCAGCGATTG
ATCTGGCAAC TGGATCAGGC GCCGACCGAA GCCTTGCTCA GTGGTTTGCT GGTGAGCACT
GAAGTGGCGG GTGAATATCG CTGTGAGCGC ACGCTGTTCT GGCAACTGCC GCAGCCGTGG
CTCGGCACCT CGCTGACCGG CAGTTATCCG CAGCAGATGG TTATCAGCAA CGGCAAGCGC
CATCCGTTGC GACCGGTGAA ACCGCGCGGT GAGGTTTATC GGCGCTTCGA TGCGCGCCTC
GGTGCCAGGA TTTCCCTGCG AACGGTGGAG ATCGAGCAGG ATCTGGCGCG TTTCAATCGC
TGGCAGAACA GCCCGCGAGT CGCCAGTTTC TGGCAGGAAG AGGGCAGCCT CGAACAGCAT
CGCGAGTACC TGAGCAAACT CGACGCCGAT CCGCACACGC TGACCCTGAT CGGTTGTTTC
GATGATCAGC CGTTTGCCTA TTTCGAAGCC TACTGGGCTA AGGAAGATCG CATCGCACCG
TTCTACGATG CCGACAATTA CGATCGCGGC ATTCACATGC TGGTCGGGGA AGAAGACCAT
CGCGGCCCGC ACAAGGTGGC GAGCTGGCTG TCGGCGCTGG TGCACTACCT GTTCCTGGAT
GATCCGCGCA CGCAGCGGGT GGTCGCCGAA CCCCGTGCCG ACAACGCGAA AATGATTGGC
CACATGCACA ACCAGTGCTT CCACTGCGAG AAGGAATTCG ACTTCCCGCA CAAACGCGCG
GCGCTGATGA TTCTCGGGCG CGAGCGCTTT TTCGACCGCT GCACGCTGGT GTGA
|
|---|
| Protein sequence | MSNLNDLTAL ALPSGSQLVA DATESRLSLS LEGQPLIRLR LDREGQGPIQ IDERYALPPG
QALWAACYWL FARDPACQRL IWQLDQAPTE ALLSGLLVST EVAGEYRCER TLFWQLPQPW
LGTSLTGSYP QQMVISNGKR HPLRPVKPRG EVYRRFDARL GARISLRTVE IEQDLARFNR
WQNSPRVASF WQEEGSLEQH REYLSKLDAD PHTLTLIGCF DDQPFAYFEA YWAKEDRIAP
FYDADNYDRG IHMLVGEEDH RGPHKVASWL SALVHYLFLD DPRTQRVVAE PRADNAKMIG
HMHNQCFHCE KEFDFPHKRA ALMILGRERF FDRCTLV
|
|---|
| |