Gene Pfl01_3869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3869 
Symbol 
ID3712515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4375632 
End bp4376369 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content62% 
IMG OID 
Product5'-methylthioadenosine phosphorylase 
Protein accessionYP_349597 
Protein GI77460090 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTTT ACGCAATCAT CGGCGGCACC GGCCTGACCC AGTTGGAAGG CCTGAGCATT 
CGTCAGTCGC TGGCGGTGGA TACGCCCTAT GGCGCGCCAT CGGCCGAGGT TCAGATTGGT
GAGTACGCCG GCAAGGAAGT GCTGTTCCTC GCTCGCCACG GTCATCCGCA TCGCTTTCCG
CCGCACAAGG TCAACTACCG CGCCAACCTG TGGGCGTTGA AGCAGGCCGG AGCCGAATCG
ATCATTGCGG TCAACGCCGT GGGCGGGATT CATCCTGCAA TGGGCACCGG ACATTTCTGC
GTGCCGCATC AGGTCGTGGA CTACACCAGC GGTCGCGAGC ACACCTATTT CGCCGATGAC
CTGGAACATG TCACACACAT CGACTTCAGC TTTCCCTACA GCGAACCGCT GCGTCAGCAA
TTGATTGCTG CGTTGGCCGC CGAAGGTTGC GAGTACAGCG ATCAGGGCGT TTACGCCTGC
ACCCAAGGCC CGCGTCTGGA AACCGTGGCC GAGATCGTGC GCCTGGAGCG TGACGGTTGC
GACATCGTCG GCATGACCGG CATGCCGGAA GCGGCGCTGG CCCGCGAGCT GGATCTGAAT
TACGCCTGCC TGTCGTTGGT GGTGAACCCG GCGGCGGGCA AGACCACTGA AGTGATCACC
ATGGCCGAGA TCGAGCAGGC GCTGCATGAC GGGATGGGCA AGGTGAAATC GACGTTGGCG
CGGGTGCTCA AGGGCTGA
 
Protein sequence
MTVYAIIGGT GLTQLEGLSI RQSLAVDTPY GAPSAEVQIG EYAGKEVLFL ARHGHPHRFP 
PHKVNYRANL WALKQAGAES IIAVNAVGGI HPAMGTGHFC VPHQVVDYTS GREHTYFADD
LEHVTHIDFS FPYSEPLRQQ LIAALAAEGC EYSDQGVYAC TQGPRLETVA EIVRLERDGC
DIVGMTGMPE AALARELDLN YACLSLVVNP AAGKTTEVIT MAEIEQALHD GMGKVKSTLA
RVLKG