| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3771 |
|---|
| Symbol | |
|---|
| ID | 3714703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4268764 |
|---|
| End bp | 4270077 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | periplasmic sensor Signal transduction histidine kinase |
|---|
| Protein accession | YP_349500 |
|---|
| Protein GI | 77459993 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.429615 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGATCGA TCCAGCGCCG CTTGAGTCTG GGGTTGATCA GCGTGCTGGT GGTCGTCGGC
GTACTGCTGG CGCAAACCAG TCTGTGGTTG TTCGAGGTGG GATTGCAGCG CTATCTCGAA
GCCGGCTTGC GTAACGACAG CGAGAGCCTG TTGGTGGCGC TGGTTCGCGG GCCACAGGGT
TTGCAGCTGG ATGAGCGGCA CTTGTCGCCG GCCTATCAGC GACCGTTTTC CGGGCATTAC
TTCCGCATCG ATTTCGCCGA CAGCCATTGG CGCTCCCGCT CGTTGTGGGA TCAGGATCTG
CCGTTGCTCG AACGCTCCGG TCTGCACAGC AACCTGCAAC TGGGGCCGGA CGGTCAGCAA
CTGCTGGTGC TGCGTTCGGA CTACCGACGG CTCGGCCAGT CGATTTCCAT CAGCGTGGCT
CAGGATTACA CCCCGGTGCG CGAGAGCTTC CAGCGCATGC GGCAGATCGG TCTCGGCCTC
GGGCTCGCCG GGTTGCTGCT GATTCTATTG CTGCAACGCC TGACCGTGCG CCGCGCCTTG
CGTCCGCTGG AAAAGGCTCG CGAACAGATC GCCCAGTTGC AGCAGGGCCA GCGTTCACAA
CTCGATGAAC AAGTGCCGGC GGAACTGGAG CCGCTGGTGG CGCAGATCAA CCACTTGCTG
GCGCACACCG AAGACAGCCT CAAGCGCTCG CGCAATGCTC TGGGCAATCT CGGGCATGCG
CTGAAAACCC CGTTGGCAGT GCTGCTCAGT CTGGCGTCGA GTGAAAGGCT CGACGCACAC
CCGGAGCTGC GCAAGATTCT CAAGGAACAA CTGGAGCAGG TTCAGCAGCG ACTGAATCGC
GAACTCAATC GTGCGCGCCT GTCCGGCGAT GCGTTGCCGG GAGCGCTGTT CGATTGCGAT
GCGGAGCTGC CGGGGCTGCT GTCGACGTTG AACATGATTC ATGGCGAGCA TCTGGAGTTG
AGTTATGTGG CACCGCCGGG CCTGCAATTG CCGTGGGATC GTGAGGATCT GCTGGAACTG
CTCGGCAATC TGTTGGACAA CGCCTGCAAG TGGGCGGATG CCGAGGTGCG ACTGAGCGTG
CTTGAGCGGA CGGATGGCTT CGCCCTGAGC GTTGAAGATG ACGGGCCGGG AATTCCCGAA
TTGCAGCGTG CTCAGGTGTT CAGTCGTGGT ACGCGACTGG ACGAGCAGAC CGACGGGCAT
GGCTTGGGCC TGGGGATTGT GCGCGACATC GTCGACACCT GGGGTGGGTT GCTGGTGTTG
GGTGAGAGTG AGTGGGGCGG TTTGAAGGTG GTGATCGAAT TGCCTAAACG CTGA
|
|---|
| Protein sequence | MRSIQRRLSL GLISVLVVVG VLLAQTSLWL FEVGLQRYLE AGLRNDSESL LVALVRGPQG
LQLDERHLSP AYQRPFSGHY FRIDFADSHW RSRSLWDQDL PLLERSGLHS NLQLGPDGQQ
LLVLRSDYRR LGQSISISVA QDYTPVRESF QRMRQIGLGL GLAGLLLILL LQRLTVRRAL
RPLEKAREQI AQLQQGQRSQ LDEQVPAELE PLVAQINHLL AHTEDSLKRS RNALGNLGHA
LKTPLAVLLS LASSERLDAH PELRKILKEQ LEQVQQRLNR ELNRARLSGD ALPGALFDCD
AELPGLLSTL NMIHGEHLEL SYVAPPGLQL PWDREDLLEL LGNLLDNACK WADAEVRLSV
LERTDGFALS VEDDGPGIPE LQRAQVFSRG TRLDEQTDGH GLGLGIVRDI VDTWGGLLVL
GESEWGGLKV VIELPKR
|
|---|
| |