Gene Pfl01_3646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3646 
Symbol 
ID3715073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4123330 
End bp4127004 
Gene Length3675 bp 
Protein Length1224 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349375 
Protein GI77459868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0441929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGTG GTTTGAAAAT ATCGGCGCTG GCGTTGTTGT CGCTGGTGCT GCTGATTGTA 
TTGAGCATTA CCGCTGTGCT CGGAACTCAG GCCGGCAGCC GTTGGGTGCT GGGTCTGGTA
CCGGGCCTGA GCGTCGACAA TTTCCAGGGT CGCCTCGGCG GGCAGTGGAG CGCCGATCAT
CTGCTGTGGC AGCAGGACAG CAGCCGCGTC GAACTGAGCA AACCGATCTT CGAGTGGTCG
CCGCTGTGCC TGACGCGCAT GACGTTGTGC ATCGAACAGC TCAAGGCCGA TACCGTCAGC
CTGCAATTTC CGCCGAGCGA GGACGTCACC GAAAGCGGTC CGATCACACT TCCTGATCTG
CAATTGCCCG TGGCCATCGA GCTGGGCGAC GTTCAGGTCG GCAACCTGTT GTTCAACGGC
AGTGAAGAGT TGAAAGGCCT GCAACTGGCG GCGCATTGGA CCGCCAAGGG CCTGCAGATC
GACAGTGTGA AACTGCAGCG CGACGAGTTG AGCCTGAACC TGTCCGGCCT GTTGCAACCG
ACCGGCAACT GGCCGCTGAA CATCGCCGGT GATCTGACCT TGCCGTCGCC GGCACCCGAA
CCGTGGACGC TGGCGCTGAA AGTCGACGGC GACCTGCTGA AAACCCTCAA CCTGCACGCC
GACAGCCGTG GCTACCTCGA CGGCCAGTTG AGCGGCGAGC TGCAACCGCT GGTAGAAGAC
CTGCCGGCCA AAGTGCGGAT CACCTCGGAG GCTTTCAAGC CGAGCGCCGA TCTGCCGGAT
ACCCTGCAAT TCAATCAACT GGTATTGACC GGCGAAGGCG ACCTGAAGAA CGGTTACCAA
TTGCTCGGCA ATGCGACACT GCCTGCCGAA AAAGGCCCGG TGGCGTTGCT GCTCAAAGGC
AAGGTCGACG CCAAAGGCGC GCAGATTGCC GGCCTCGATC TGACGGCCAA CGACAAGCAA
AGCCTCAAGC TCACCGGCAA TGTCGACTGG AGCAAAGGCC TCAGTGCCCA GGCCAATATC
AACTGGCTGG ATTTTCCGTG GCACCGGCTC TATCCGGAGA TCGACGAGCC GCAGATCACG
TTGCGTACCT TCACCGGCGA AGTCTCCTAC ACCGACGGTC AGTACATCGG TAATTTCGCC
GCCGCTGCAG ATGGTCCGGC GGGGGCGTTC ACCCTGAGCA GTCCGTTCAG CGGCAATCTC
AAGCAGATCT TCCTGCCACA ACTGAAACTC GAAGCCGGGC AGGGCAAGGC CGAAGGCCAT
GTGAACGTGC AGTTCGCCGA TGGCATCGCC TGGGACACCG CGCTGGAATT GTCGGCGCTC
AACCCGGCGT ATTGGGTCGC GGAGCTGCCG GGCACCCTGG CCGGTCCGTT AAAGAGCAAA
GGCGAAATGA AAAACGAGCG CCTGAGCCTG AACGCCGACC TCGATCTGAA GGGCAAATTG
CGCGGGCAAC CGGCGATCCT GCAAGCCAAG GCCGACGGCG CGGGCGAGCA GTGGAATCTG
AATGCCCTGC AAATCCGCCT CGGCGACAAC AGCATCAACG GCAAGGGCAG CCTGCAACAG
AAACTCACGG GACAGATCGA CATCAAACTG GCGCGTCTGG CCCAGCTTTG GCCGCAACTG
CGCGGGCAGA TCAATGGTCG GGTCGATGTC GCCGGCACGC TCAAGGCGCC GCAAGGCAAG
CTCGGCCTGC AAGGTTCGCA ACTGGCGTTC CAGGACAATC GCCTGCAAAG CCTCAACCTC
GACGCCACCC TCGACAGCGC GCAACGGGCG AAAATCGACC TCAAGGGCAG TGGCATCCAG
GCTGGCGATA CGTCGCTGGG CACCCTGACC GCCAGCGCTC AGGGCGATAT CAAAAACCAG
AAACTCAACC TCGACCTGCT CGGGCCGAAG CTGAAACTGG CGCTGGGCCT GGACGGCAAT
CTGGACAAAG GCAACTGGCG CGGGCGTCTG GCCAGTGGTG ATATTCAGGC CGGCGGCCAG
GACTGGAAAC TGCAGAACCC GGCCAAGCTC GAGCGTCTGG CCGACGGCAA GATCAACTTC
GGCGCCCATT GCTGGATGTC CGGCAATGCC AGCCTGTGTG GCGAAGACCA GCGCCTGATG
CCGGAGCCGA AGCTGCGTTA TCACCTCAAG CAATTCCCGA TCGAAAGCCT GGCGCAATGG
CTGCCGAAGG ATTTCGCCTG GCAGGGCAAG CTCAACGCCG ACCTGCAACT GGATCTGCCG
GCCAGCGGCC CGAACGGCGT GGTCAGCATC GATGCCAGCG GCGGCACCTT GCGCATGAAG
GAAAAGGATC AGTGGGTCGA CTTCCCGTAC CAGACCCTCA AGCTCACCAG CAAACTCACG
CCCAAGCGCA TCGACACCGA CCTCAACTTC GTCGGTGGCA AGCTCGGTGA ATTGATGGTG
CAGGCGCAGC TCAACCCGCT GCCGAAGAAC AAGCCACTCA GCGGTACATT CCGCCTCAGC
GGACTGGATC TGTCGGTGGC GCGGCCGTTT GTGCCGATGG TCGAGAAACT CACCGGGCGG
CTGAACGGCA GCGGCACGAT TTCCGGTGGT CTGCTCGCGC CGCTGGTCAA CGGTACGGTG
CAACTCAGCG ACGGCGAAGT GTCCGGGCCA GAGTTGCCGA TCGAACTGCA AGCGTTGCAA
CTGCAAGCGG TGATCGCCGG TGAAGCCGTG CAATTGAACG GCGCCTGGAA AAGCGGCAAG
AGCGGGCAGG GCAGCCTGAA CGGCAACATC GCCTGGGGCC AGGCGCTGGT GGTGGATCTG
GCGCTCAAGG GCACGCAATT GCCAGTGACG GTCGAACCCT ACGCCAAACT GGAAGTGGCG
CCGGACCTGA AGATTTCCAT GGCCGGCGAT GAGCTGGCGA TTGCCGGCAA GGTGCTGGTG
CCGACAGGCG AAATCACAGT GCGCGAACTG CCGCCATCGA CGGTGAAAGT CTCCGATGAC
ACGATCATCG TCGGCGCGCA GACCGAAGAG GGCAAGCCGC CGCTGGCGAT GAAAATGGAC
ATCGACGTGG TGGTCGGCCA GGACAAGTTG AGCTTCGCCG GATTCGGCCT GACCGCCAAC
CTGCAAGGCC ACGTGCACAT CGGCGACAAC ATGGACACCC GTGGCGAACT GTGGCTCAAC
GACGGGCGTT ATCGCGCCTA CGGCCAGCGC CTGACGGTGC GTCGCGCGCG TCTGCTGTTT
GCCGGGCCGA TCGATCAGCC GTATCTGGAC ATCGAAGCGA TTCGCCAGAC CGATGACGTG
ATCGCCGGCA TTCGCTTGAG CGGCAGCGCC GAGCAGCCGA CCACGCAGAT CTTCTCGGAG
CCGGCGATGA GTCAGGAACA GGCGCTGTCC TATCTGGTGC TGGGGCGTCC GCTGAGCACT
ACCGGCGAAG ACAACAACAT GCTCGCGCAG GCGGCGCTCG GTCTGGGCCT GATGGGCAGT
TCCGGGGTCA CCAGCAGTTT GGCTAGTAAT TTGGGCATTC AGGACTTCCA GCTCGACACC
CAGGGCAGCG GCAACACCAC CAGCGTGGTG GCCAGCGGCA ACATCTCGGA AAAACTCAGC
CTGCGTTACG GCGTCGGCGT GTTTGAACCG GCCAACACCA TCGCCTTGCG TTACAAACTG
AGCAAGAAGG TCTACCTCGA AGCCGCCAGC GGCGTGGCCA GTTCGCTGGA CATCTTCTAC
AAGCGGGATT TCTAG
 
Protein sequence
MKRGLKISAL ALLSLVLLIV LSITAVLGTQ AGSRWVLGLV PGLSVDNFQG RLGGQWSADH 
LLWQQDSSRV ELSKPIFEWS PLCLTRMTLC IEQLKADTVS LQFPPSEDVT ESGPITLPDL
QLPVAIELGD VQVGNLLFNG SEELKGLQLA AHWTAKGLQI DSVKLQRDEL SLNLSGLLQP
TGNWPLNIAG DLTLPSPAPE PWTLALKVDG DLLKTLNLHA DSRGYLDGQL SGELQPLVED
LPAKVRITSE AFKPSADLPD TLQFNQLVLT GEGDLKNGYQ LLGNATLPAE KGPVALLLKG
KVDAKGAQIA GLDLTANDKQ SLKLTGNVDW SKGLSAQANI NWLDFPWHRL YPEIDEPQIT
LRTFTGEVSY TDGQYIGNFA AAADGPAGAF TLSSPFSGNL KQIFLPQLKL EAGQGKAEGH
VNVQFADGIA WDTALELSAL NPAYWVAELP GTLAGPLKSK GEMKNERLSL NADLDLKGKL
RGQPAILQAK ADGAGEQWNL NALQIRLGDN SINGKGSLQQ KLTGQIDIKL ARLAQLWPQL
RGQINGRVDV AGTLKAPQGK LGLQGSQLAF QDNRLQSLNL DATLDSAQRA KIDLKGSGIQ
AGDTSLGTLT ASAQGDIKNQ KLNLDLLGPK LKLALGLDGN LDKGNWRGRL ASGDIQAGGQ
DWKLQNPAKL ERLADGKINF GAHCWMSGNA SLCGEDQRLM PEPKLRYHLK QFPIESLAQW
LPKDFAWQGK LNADLQLDLP ASGPNGVVSI DASGGTLRMK EKDQWVDFPY QTLKLTSKLT
PKRIDTDLNF VGGKLGELMV QAQLNPLPKN KPLSGTFRLS GLDLSVARPF VPMVEKLTGR
LNGSGTISGG LLAPLVNGTV QLSDGEVSGP ELPIELQALQ LQAVIAGEAV QLNGAWKSGK
SGQGSLNGNI AWGQALVVDL ALKGTQLPVT VEPYAKLEVA PDLKISMAGD ELAIAGKVLV
PTGEITVREL PPSTVKVSDD TIIVGAQTEE GKPPLAMKMD IDVVVGQDKL SFAGFGLTAN
LQGHVHIGDN MDTRGELWLN DGRYRAYGQR LTVRRARLLF AGPIDQPYLD IEAIRQTDDV
IAGIRLSGSA EQPTTQIFSE PAMSQEQALS YLVLGRPLST TGEDNNMLAQ AALGLGLMGS
SGVTSSLASN LGIQDFQLDT QGSGNTTSVV ASGNISEKLS LRYGVGVFEP ANTIALRYKL
SKKVYLEAAS GVASSLDIFY KRDF