Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3646 |
Symbol | |
ID | 3715073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4123330 |
End bp | 4127004 |
Gene Length | 3675 bp |
Protein Length | 1224 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_349375 |
Protein GI | 77459868 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0441929 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCGTG GTTTGAAAAT ATCGGCGCTG GCGTTGTTGT CGCTGGTGCT GCTGATTGTA TTGAGCATTA CCGCTGTGCT CGGAACTCAG GCCGGCAGCC GTTGGGTGCT GGGTCTGGTA CCGGGCCTGA GCGTCGACAA TTTCCAGGGT CGCCTCGGCG GGCAGTGGAG CGCCGATCAT CTGCTGTGGC AGCAGGACAG CAGCCGCGTC GAACTGAGCA AACCGATCTT CGAGTGGTCG CCGCTGTGCC TGACGCGCAT GACGTTGTGC ATCGAACAGC TCAAGGCCGA TACCGTCAGC CTGCAATTTC CGCCGAGCGA GGACGTCACC GAAAGCGGTC CGATCACACT TCCTGATCTG CAATTGCCCG TGGCCATCGA GCTGGGCGAC GTTCAGGTCG GCAACCTGTT GTTCAACGGC AGTGAAGAGT TGAAAGGCCT GCAACTGGCG GCGCATTGGA CCGCCAAGGG CCTGCAGATC GACAGTGTGA AACTGCAGCG CGACGAGTTG AGCCTGAACC TGTCCGGCCT GTTGCAACCG ACCGGCAACT GGCCGCTGAA CATCGCCGGT GATCTGACCT TGCCGTCGCC GGCACCCGAA CCGTGGACGC TGGCGCTGAA AGTCGACGGC GACCTGCTGA AAACCCTCAA CCTGCACGCC GACAGCCGTG GCTACCTCGA CGGCCAGTTG AGCGGCGAGC TGCAACCGCT GGTAGAAGAC CTGCCGGCCA AAGTGCGGAT CACCTCGGAG GCTTTCAAGC CGAGCGCCGA TCTGCCGGAT ACCCTGCAAT TCAATCAACT GGTATTGACC GGCGAAGGCG ACCTGAAGAA CGGTTACCAA TTGCTCGGCA ATGCGACACT GCCTGCCGAA AAAGGCCCGG TGGCGTTGCT GCTCAAAGGC AAGGTCGACG CCAAAGGCGC GCAGATTGCC GGCCTCGATC TGACGGCCAA CGACAAGCAA AGCCTCAAGC TCACCGGCAA TGTCGACTGG AGCAAAGGCC TCAGTGCCCA GGCCAATATC AACTGGCTGG ATTTTCCGTG GCACCGGCTC TATCCGGAGA TCGACGAGCC GCAGATCACG TTGCGTACCT TCACCGGCGA AGTCTCCTAC ACCGACGGTC AGTACATCGG TAATTTCGCC GCCGCTGCAG ATGGTCCGGC GGGGGCGTTC ACCCTGAGCA GTCCGTTCAG CGGCAATCTC AAGCAGATCT TCCTGCCACA ACTGAAACTC GAAGCCGGGC AGGGCAAGGC CGAAGGCCAT GTGAACGTGC AGTTCGCCGA TGGCATCGCC TGGGACACCG CGCTGGAATT GTCGGCGCTC AACCCGGCGT ATTGGGTCGC GGAGCTGCCG GGCACCCTGG CCGGTCCGTT AAAGAGCAAA GGCGAAATGA AAAACGAGCG CCTGAGCCTG AACGCCGACC TCGATCTGAA GGGCAAATTG CGCGGGCAAC CGGCGATCCT GCAAGCCAAG GCCGACGGCG CGGGCGAGCA GTGGAATCTG AATGCCCTGC AAATCCGCCT CGGCGACAAC AGCATCAACG GCAAGGGCAG CCTGCAACAG AAACTCACGG GACAGATCGA CATCAAACTG GCGCGTCTGG CCCAGCTTTG GCCGCAACTG CGCGGGCAGA TCAATGGTCG GGTCGATGTC GCCGGCACGC TCAAGGCGCC GCAAGGCAAG CTCGGCCTGC AAGGTTCGCA ACTGGCGTTC CAGGACAATC GCCTGCAAAG CCTCAACCTC GACGCCACCC TCGACAGCGC GCAACGGGCG AAAATCGACC TCAAGGGCAG TGGCATCCAG GCTGGCGATA CGTCGCTGGG CACCCTGACC GCCAGCGCTC AGGGCGATAT CAAAAACCAG AAACTCAACC TCGACCTGCT CGGGCCGAAG CTGAAACTGG CGCTGGGCCT GGACGGCAAT CTGGACAAAG GCAACTGGCG CGGGCGTCTG GCCAGTGGTG ATATTCAGGC CGGCGGCCAG GACTGGAAAC TGCAGAACCC GGCCAAGCTC GAGCGTCTGG CCGACGGCAA GATCAACTTC GGCGCCCATT GCTGGATGTC CGGCAATGCC AGCCTGTGTG GCGAAGACCA GCGCCTGATG CCGGAGCCGA AGCTGCGTTA TCACCTCAAG CAATTCCCGA TCGAAAGCCT GGCGCAATGG CTGCCGAAGG ATTTCGCCTG GCAGGGCAAG CTCAACGCCG ACCTGCAACT GGATCTGCCG GCCAGCGGCC CGAACGGCGT GGTCAGCATC GATGCCAGCG GCGGCACCTT GCGCATGAAG GAAAAGGATC AGTGGGTCGA CTTCCCGTAC CAGACCCTCA AGCTCACCAG CAAACTCACG CCCAAGCGCA TCGACACCGA CCTCAACTTC GTCGGTGGCA AGCTCGGTGA ATTGATGGTG CAGGCGCAGC TCAACCCGCT GCCGAAGAAC AAGCCACTCA GCGGTACATT CCGCCTCAGC GGACTGGATC TGTCGGTGGC GCGGCCGTTT GTGCCGATGG TCGAGAAACT CACCGGGCGG CTGAACGGCA GCGGCACGAT TTCCGGTGGT CTGCTCGCGC CGCTGGTCAA CGGTACGGTG CAACTCAGCG ACGGCGAAGT GTCCGGGCCA GAGTTGCCGA TCGAACTGCA AGCGTTGCAA CTGCAAGCGG TGATCGCCGG TGAAGCCGTG CAATTGAACG GCGCCTGGAA AAGCGGCAAG AGCGGGCAGG GCAGCCTGAA CGGCAACATC GCCTGGGGCC AGGCGCTGGT GGTGGATCTG GCGCTCAAGG GCACGCAATT GCCAGTGACG GTCGAACCCT ACGCCAAACT GGAAGTGGCG CCGGACCTGA AGATTTCCAT GGCCGGCGAT GAGCTGGCGA TTGCCGGCAA GGTGCTGGTG CCGACAGGCG AAATCACAGT GCGCGAACTG CCGCCATCGA CGGTGAAAGT CTCCGATGAC ACGATCATCG TCGGCGCGCA GACCGAAGAG GGCAAGCCGC CGCTGGCGAT GAAAATGGAC ATCGACGTGG TGGTCGGCCA GGACAAGTTG AGCTTCGCCG GATTCGGCCT GACCGCCAAC CTGCAAGGCC ACGTGCACAT CGGCGACAAC ATGGACACCC GTGGCGAACT GTGGCTCAAC GACGGGCGTT ATCGCGCCTA CGGCCAGCGC CTGACGGTGC GTCGCGCGCG TCTGCTGTTT GCCGGGCCGA TCGATCAGCC GTATCTGGAC ATCGAAGCGA TTCGCCAGAC CGATGACGTG ATCGCCGGCA TTCGCTTGAG CGGCAGCGCC GAGCAGCCGA CCACGCAGAT CTTCTCGGAG CCGGCGATGA GTCAGGAACA GGCGCTGTCC TATCTGGTGC TGGGGCGTCC GCTGAGCACT ACCGGCGAAG ACAACAACAT GCTCGCGCAG GCGGCGCTCG GTCTGGGCCT GATGGGCAGT TCCGGGGTCA CCAGCAGTTT GGCTAGTAAT TTGGGCATTC AGGACTTCCA GCTCGACACC CAGGGCAGCG GCAACACCAC CAGCGTGGTG GCCAGCGGCA ACATCTCGGA AAAACTCAGC CTGCGTTACG GCGTCGGCGT GTTTGAACCG GCCAACACCA TCGCCTTGCG TTACAAACTG AGCAAGAAGG TCTACCTCGA AGCCGCCAGC GGCGTGGCCA GTTCGCTGGA CATCTTCTAC AAGCGGGATT TCTAG
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Protein sequence | MKRGLKISAL ALLSLVLLIV LSITAVLGTQ AGSRWVLGLV PGLSVDNFQG RLGGQWSADH LLWQQDSSRV ELSKPIFEWS PLCLTRMTLC IEQLKADTVS LQFPPSEDVT ESGPITLPDL QLPVAIELGD VQVGNLLFNG SEELKGLQLA AHWTAKGLQI DSVKLQRDEL SLNLSGLLQP TGNWPLNIAG DLTLPSPAPE PWTLALKVDG DLLKTLNLHA DSRGYLDGQL SGELQPLVED LPAKVRITSE AFKPSADLPD TLQFNQLVLT GEGDLKNGYQ LLGNATLPAE KGPVALLLKG KVDAKGAQIA GLDLTANDKQ SLKLTGNVDW SKGLSAQANI NWLDFPWHRL YPEIDEPQIT LRTFTGEVSY TDGQYIGNFA AAADGPAGAF TLSSPFSGNL KQIFLPQLKL EAGQGKAEGH VNVQFADGIA WDTALELSAL NPAYWVAELP GTLAGPLKSK GEMKNERLSL NADLDLKGKL RGQPAILQAK ADGAGEQWNL NALQIRLGDN SINGKGSLQQ KLTGQIDIKL ARLAQLWPQL RGQINGRVDV AGTLKAPQGK LGLQGSQLAF QDNRLQSLNL DATLDSAQRA KIDLKGSGIQ AGDTSLGTLT ASAQGDIKNQ KLNLDLLGPK LKLALGLDGN LDKGNWRGRL ASGDIQAGGQ DWKLQNPAKL ERLADGKINF GAHCWMSGNA SLCGEDQRLM PEPKLRYHLK QFPIESLAQW LPKDFAWQGK LNADLQLDLP ASGPNGVVSI DASGGTLRMK EKDQWVDFPY QTLKLTSKLT PKRIDTDLNF VGGKLGELMV QAQLNPLPKN KPLSGTFRLS GLDLSVARPF VPMVEKLTGR LNGSGTISGG LLAPLVNGTV QLSDGEVSGP ELPIELQALQ LQAVIAGEAV QLNGAWKSGK SGQGSLNGNI AWGQALVVDL ALKGTQLPVT VEPYAKLEVA PDLKISMAGD ELAIAGKVLV PTGEITVREL PPSTVKVSDD TIIVGAQTEE GKPPLAMKMD IDVVVGQDKL SFAGFGLTAN LQGHVHIGDN MDTRGELWLN DGRYRAYGQR LTVRRARLLF AGPIDQPYLD IEAIRQTDDV IAGIRLSGSA EQPTTQIFSE PAMSQEQALS YLVLGRPLST TGEDNNMLAQ AALGLGLMGS SGVTSSLASN LGIQDFQLDT QGSGNTTSVV ASGNISEKLS LRYGVGVFEP ANTIALRYKL SKKVYLEAAS GVASSLDIFY KRDF
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