Gene Pfl01_3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3540 
Symbol 
ID3713840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4015969 
End bp4016526 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content61% 
IMG OID 
ProductYceI 
Protein accessionYP_349269 
Protein GI77459762 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.27831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATTC GATTGTTGTT GGCGGCCGCG TCTTGCCTGA CCTTCATCCC TGCTGCGAGT 
GCGGTGGAGT ACACCCGGGT CAACACCACC GCCAGCCAGA TCAGTTTCAC TTACAGCCAG
ATGGGCTCGC GGATGTACGG CACGTTCGGC AAGTTCGACG CGACGCTGGA TTTCGACAGC
GATAACCTCG CCAACGCCCG CACCACGCTG CACATCGACC TGACCAGCAT CGACGCCGGC
AGTGAAGATG CCAATACCGA GCTGGTGAAA CCGGCGTGGT TCGACACCGA TAAATTCCCG
GTGGCGGTGT TCGAATCGAC CCGCTTCAGC CCGGTCGGCG CCGACCGTTA TCTGGTCGAC
GGCCACCTGA CCCTCAAAGG CATCACCCGT GAGGTGCAGG TGCCGGTGCA ACTCAAACCC
GACAGCAGCA TTGGCATCTT CGACGGCGAA CTGGTGCTCA AGCGCGACCA GTTCGGCCTC
GGCGCGGGGG AGTGGGCGGA CACCGTGGTG TCGAAGGATA TCGACATCAA GTTCAAGGTC
GTTGCCCCTG CGCAGTGA
 
Protein sequence
MSIRLLLAAA SCLTFIPAAS AVEYTRVNTT ASQISFTYSQ MGSRMYGTFG KFDATLDFDS 
DNLANARTTL HIDLTSIDAG SEDANTELVK PAWFDTDKFP VAVFESTRFS PVGADRYLVD
GHLTLKGITR EVQVPVQLKP DSSIGIFDGE LVLKRDQFGL GAGEWADTVV SKDIDIKFKV
VAPAQ