Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3216 |
Symbol | |
ID | 3713032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3695617 |
End bp | 3696861 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | exodeoxyribonuclease I subunit D |
Protein accession | YP_348945 |
Protein GI | 77459438 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.569023 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGTCTGT TTCACACCTC CGACTGGCAC CTTGGGCAGA ACCTCCACGG GCAGGAGCGC GATTTCGAGC ACGCCTGTTT TCTCGAGTGG CTGCTGCGCC AATTGAAGCT GGCGCAGCCG GACGTGCTGC TGATCGCCGG CGACATCTTC GACACCGTCA ACCCGCCGGT CAAAGCCCAG GAACGCCTCT ACGATTTCAT CGTCAGCGCC CACGAACAAC AGCCGTTGCT GACCATCGTG ATGATCGCCG GCAACCACGA TTCCGGCTCG CGGATCGAAC TGCCGGCGCC GTTGATGCGG CGTTTGCGTA CCCATGCGCT GGGCCGGGTG TTGTGGCTGG ATGACGGGCA GCTGGATGCG GAACGTCTGC TGCTGCCGCT GCCGAATGCT TCCGGCGAGA TCGCCGCGTG GTGCCTGGCG CTGCCGTTCC TGCGGCCTGC CGAAGTGACC GGCGCGCATC TGGGCGATAA CTATTTGCGC GGGATCGGTC AGGTGCATGA ATGGCTGATC GAAGCGGCGA ACGCCAAACG CCAGCCGGGC CAGGCACTGG TCGCCATCAG CCATGCGCAC ATGGCCGGCG GCTCGGTGTC GGAAGACTCC GAGCGCAGCC TGATCATCGG CAACGCCGAA GCCCTGCCTG CCAGCCTGTT CGGGCCGAGC ATCAGCTATG TCGCCCTCGG CCATTTGCAC AAGCCGCAGA AGGTCAATGG CGAAGAAAGA ATTCGCTACA GCGGCTCGCC GATCCCGTTA TCGTTCTCGG AAATCGCCTA TCAACATCAG ATTCTCGACA TCGTGCTCGA CGGCGAAACC CTGGTCAGCG TCGAGCCAAA ACTGATCCCT CGCGCGGTCA ATCTGCAACG CCTCGGCCCT GCGCCGCTGG CCGAAATCCT GCTGCAACTG GCGGATCTGC CGAACATCGA CCTGCTGGCC GAAACCCAGC GTCAGCCGTG GCTGGAAGTG CGGGTGCGCC TCGACGAACC GCAGCCGGAT CTGCGCCATC AGGTCGAAAG CGCCTTGCAA GGCAAAGCCG TACGACTGGT GCGGATCGCC GCCGAATACG CCGGCAATCG GGGCGCTGAC GGCGCCGAGG ACGGCAGCGC GCTGATCGAA CTGGACCAGC TCACGCCGCA GGAATTGTTC AGCCGCGCCT GGCTCGACAA TTACGGCAAC GAGGTCGACG AGCAAACCCT CAAGGACTTC GCCGAGCTGC TGCAAGACGT ACAAATGGAG GGCGAGCAGC CATGA
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Protein sequence | MRLFHTSDWH LGQNLHGQER DFEHACFLEW LLRQLKLAQP DVLLIAGDIF DTVNPPVKAQ ERLYDFIVSA HEQQPLLTIV MIAGNHDSGS RIELPAPLMR RLRTHALGRV LWLDDGQLDA ERLLLPLPNA SGEIAAWCLA LPFLRPAEVT GAHLGDNYLR GIGQVHEWLI EAANAKRQPG QALVAISHAH MAGGSVSEDS ERSLIIGNAE ALPASLFGPS ISYVALGHLH KPQKVNGEER IRYSGSPIPL SFSEIAYQHQ ILDIVLDGET LVSVEPKLIP RAVNLQRLGP APLAEILLQL ADLPNIDLLA ETQRQPWLEV RVRLDEPQPD LRHQVESALQ GKAVRLVRIA AEYAGNRGAD GAEDGSALIE LDQLTPQELF SRAWLDNYGN EVDEQTLKDF AELLQDVQME GEQP
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