Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3178 |
Symbol | |
ID | 3712977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3659573 |
End bp | 3660526 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | general secretion pathway protein K |
Protein accession | YP_348907 |
Protein GI | 77459400 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.48271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0234949 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAGCC AATCGAACCA GCAGGGGATG GCGATCATCA GTGCGCTGCT GATTGCGGCG GTGGTCGCAG TGATCGCTGC CGGCATGCTG ACTCGCCAGA GCGTTTCGAC CCGGGCGCTG GAAGCCGAAC AACTGCGCGT GCAGGGCCGT TGGGTGTTGC ACGGCGGGTT GGAGATCAGC CGGCAGTTGT TGTGGGATGC ACGGCAGCGC GATCCGTTGA CCCGGCTCGA TCAACCGTGG GCGCAGTTGT TGAACACTCA GGGTTTCGAA GGGCGACTGG AGGACGAGCA GGGCAAGTTC AACCTGCGCA ATCTGGTGGC CAACGAGCGG ATCGATGACG TGCAGGTGCA GGCGTTCGAG CGCTTGTGCG AGTTGATCGG TGTCAGCAGC GGCTTGAGCC GGCGCATCAG TCAGCGGGTG ATCGGCTCTT ATCCGCACCT GTTGAATGCC CAAGTGGTGG ACAAGCCTGT GGCGAAAAAC ACCTTCGACA GCGGGCGCGC CACGTCGCCG TCCGCTTCGC GCAAACCGCA ATCGCCGACC TTGCCGATGC TGCGCACGCT TGATGATTTG CGCAGTGTCG ACGGGGTCAA CGATGCGCTG TTGGCGAAAC TGGCGCCGTA CCTGACGGTG ATTCCGGCGA CCACCTGGCT CAACGGCAAC ACCGCCACGG CGCCGGTGCT GGCGGCTTAT GTGCCGGGGC TGTCGCTGGA GCGGGCGCAG GCGTTGATCA ATGAGCGTGA CGCCGGGCGC TGGTTTATCA ATCGCGGGGA TTTCGTCAAT CGCCTGCGAC TGCCGCAACT GGAGATCACC AGCGTCAAGG TCGGCATCAC CAGCGACTGG TTCCGGCTGC GCGGGCAGGC ACGGCGGGAT CAGCGGCGGG TCAGCCTCGA TGCGTTGTTG CATCGCAGTG AAGACCGCTT GCCGCAAGTG ATCTGGTCGC GGGTGGGCGT ATGA
|
Protein sequence | MNSQSNQQGM AIISALLIAA VVAVIAAGML TRQSVSTRAL EAEQLRVQGR WVLHGGLEIS RQLLWDARQR DPLTRLDQPW AQLLNTQGFE GRLEDEQGKF NLRNLVANER IDDVQVQAFE RLCELIGVSS GLSRRISQRV IGSYPHLLNA QVVDKPVAKN TFDSGRATSP SASRKPQSPT LPMLRTLDDL RSVDGVNDAL LAKLAPYLTV IPATTWLNGN TATAPVLAAY VPGLSLERAQ ALINERDAGR WFINRGDFVN RLRLPQLEIT SVKVGITSDW FRLRGQARRD QRRVSLDALL HRSEDRLPQV IWSRVGV
|
| |