Gene Pfl01_3160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3160 
Symbol 
ID3712920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3628267 
End bp3629091 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content64% 
IMG OID 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_348889 
Protein GI77459382 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.913146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGGGT TCGATCTCAG TCATCACACG GAATTCCGAT CCATGAAAAT CCCGAAAGCC 
CGCTGGACCA CCAGAGCAAC CTCCATAGCG TTCTGCCTGC TCTTCTGGCA ACTAGCCGCC
AGCCACCACT GGAACCTCGG CCTCGTCACC TTCGCCAACG TCCCGACCCC GCTGGCCGTG
ATCGAAGCCG CGCTCGGCCT CGGCGACTCC GGCAAGCTCA TCCAGCACCT GAGCGCCAGC
CTTGGCCGGG TCTTCGCCGG CTACCTCGCG GCGCTGGTGA TCGGCATCGC CCTGGGCCTG
GCCATCGGCC GTTCGAAATG GGCCGAAGAC CTGCTGCTGC CACCGCTGGA AGTACTGCGC
CCAATCCCCG CCGTGGCATG GATTCCACTG GCCATCCTGA TGTTCCCGTC GTCGGAACTG
TCGATGGTCT TCATCACCTT CACCGGCGCG CTGTTCCCGA TCCTGCTCAA CACCGTGCAC
GGCGTCGAAG GCGTCGACCC GCGGCTGATC GCCTCGGCCA AAAGCCTCGG GGCCGGGCGT
CGGGCGATCC TGCTGGAAGT GATCCTGCCG GGCGCCGCAC CGAGCATCAT CACCGGGCTC
GCCATCGGCA TGGGCACCTC GTGGTTCTGT CTGGTGACCG CCGAAATGAT CTCCGGTCAG
TTCGGCATCG GTTACTACAC CTGGGAGTCC TACACCATCC AGAACTACGC CGACATCGTG
GTCGGCATGT TGCTGATCGG CGTGTTGGGC ATGGGCAGCA GCCTGCTGAT CAAACGCCTG
GGCGGGCTGT TCACTCCCTG GCATCGACCA CGAGGAAAAG CCTGA
 
Protein sequence
MRGFDLSHHT EFRSMKIPKA RWTTRATSIA FCLLFWQLAA SHHWNLGLVT FANVPTPLAV 
IEAALGLGDS GKLIQHLSAS LGRVFAGYLA ALVIGIALGL AIGRSKWAED LLLPPLEVLR
PIPAVAWIPL AILMFPSSEL SMVFITFTGA LFPILLNTVH GVEGVDPRLI ASAKSLGAGR
RAILLEVILP GAAPSIITGL AIGMGTSWFC LVTAEMISGQ FGIGYYTWES YTIQNYADIV
VGMLLIGVLG MGSSLLIKRL GGLFTPWHRP RGKA