| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3082 |
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| Symbol | |
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| ID | 3712769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 3530653 |
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| End bp | 3531765 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | pilus retraction protein PilT |
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| Protein accession | YP_348811 |
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| Protein GI | 77459304 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.184525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATCG ACGCATTGCT CAAACAACTG GCGAGCCGCC ACGGTTCGGA TCTGTTCCTG
TCCACGGGCG CACCGCCGAG TGCGCGGTTC GACGGGGTGC TCACGCCCTT GAACGATCAG
CCCTTCAAGC CCGGCGAAGT GGCGACTGTC GCCACCTCCC TGATGGACGC CGAGCAGCGC
CGGGAGTTCG ACCGGGATCT GGAAATGAAC CTGGCGATTT CCCGCACCGG CATCGGCCGC
TTCCGGGTCA ATATATTCAA ACAGCGCAAC GATGTGTCAA TCGTGATCCG TAACGTCAAA
CTCGACATTC CGCGATTCGA AGACCTCAAA TTGCCAGCGG TATTGCTGGA AACGGTGATG
CTCAAACAGG GGCTGATCCT GTTTGTCGGT GCTACGGACT CGGGCAAGTC GACCTCGCTG
GCGGCATTGA TCGATCATCG CAATCGCCAT AGCAGCGGGC ACATCATCAC CATTGAAGAC
CCGGTGGAAT ACATCCATCG CCACAAGAAA TCGATCATCA ACCAGCGCGA AGTCGGGGTC
GATACCCGCA GCTTTCACGC TGCACTGAAA AACACCCTGC GCCAGGCCCC GGACGTGGTG
CTGATCGGCG AGATCCGTGA CCGCGAGACC ATGGAGCATG CGCTGGCCTT CGCCGAAACC
GGGCATCTGG TGCTGTCGAC ATTGCACGCC AACAACGCCA ATCAGGCGCT GGACCGGATC
ATCAATTTCT TTCCCGAAGA GCGTCGCCCG CAATTGCTGC ACAGTTTAGG CAATCATTTG
AAGGCCTTCG TTTCCCAACG TCTGGTACGC ACGCTTGATG GCCAGCGACG GGCGGCAGTG
GAAGTCATGT TGGGGTCGCC CACCATTGCC GACCTCATTC GTCGCAATGA ACTGGGCGAG
TTGAAAGTCA TCATGGAAAA ATCCACAGAG CTGGGCATGC AGACTTTCGA TGACGCACTT
TACAAGTTGG TGGCTGAAGG TGTTTTAAGT GTGCAGGAGG CACTTAAACA TGCGGACTCA
ATCAATAATT TGAAGTTGAA GTTGAAGTTG AAGTTGGAGC GCCAAGGCGA GACGCCCACT
TCAAGTTCGG GTGAATGGGG GCTGGCTGAT TGA
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| Protein sequence | MEIDALLKQL ASRHGSDLFL STGAPPSARF DGVLTPLNDQ PFKPGEVATV ATSLMDAEQR
REFDRDLEMN LAISRTGIGR FRVNIFKQRN DVSIVIRNVK LDIPRFEDLK LPAVLLETVM
LKQGLILFVG ATDSGKSTSL AALIDHRNRH SSGHIITIED PVEYIHRHKK SIINQREVGV
DTRSFHAALK NTLRQAPDVV LIGEIRDRET MEHALAFAET GHLVLSTLHA NNANQALDRI
INFFPEERRP QLLHSLGNHL KAFVSQRLVR TLDGQRRAAV EVMLGSPTIA DLIRRNELGE
LKVIMEKSTE LGMQTFDDAL YKLVAEGVLS VQEALKHADS INNLKLKLKL KLERQGETPT
SSSGEWGLAD
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