Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2955 |
Symbol | |
ID | 3712365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3394440 |
End bp | 3395021 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | TetR family transcriptional regulator |
Protein accession | YP_348686 |
Protein GI | 77459180 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAGAC CGCAGACATT CAATACGCAA GAAGCTTTAC ACAAGGCAAT GGTCGTGTTC TGGCGCAAAG GTTATGAGGC AACTTCAATA ATTGACCTTC TCGGCGCCAC GGGGCTGAGC AAAAGCAGTT TGTACGCAAC ATTTGGCGGC AAGCGCGAGT TATTTATTAT GGCGTTCGAC GCCTATCGTC GTGAGCGAGC TAAAGACATG CATAGAGCCT TGCAGGACGG CCCTGCACGC CTGTCTATCG AGTCGTTCTT CCGTTCTCTT TTTGCTGACC TTAATGACCC AAGTGAATCT CATGGCTGCA TGAGCATCAA TCAAGCTGTA GAGATGGCGG CACATGATCT TGATGTCCGT CAGAGGGTCA TGGAGGACTT TCGTCTCATT GAGGAGGCGT TGGAGAGGGC GATTGAGCGA GGGCAACAAG ATGGATCATT GGGTAGTAAT CGGAATGCCC GAGAATTGGC CCGTCTGTTG GTTCTGGCTT TTCCCGGACT GCAGGTCATG GCACGTGCTG GATACACGAA ACAAGATTTA GAAAGTGCGC TGCACCTGCT GCTGTCGAAT TTGGATTTGT AA
|
Protein sequence | MSRPQTFNTQ EALHKAMVVF WRKGYEATSI IDLLGATGLS KSSLYATFGG KRELFIMAFD AYRRERAKDM HRALQDGPAR LSIESFFRSL FADLNDPSES HGCMSINQAV EMAAHDLDVR QRVMEDFRLI EEALERAIER GQQDGSLGSN RNARELARLL VLAFPGLQVM ARAGYTKQDL ESALHLLLSN LDL
|
| |