Gene Pfl01_2955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2955 
Symbol 
ID3712365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3394440 
End bp3395021 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content51% 
IMG OID 
ProductTetR family transcriptional regulator 
Protein accessionYP_348686 
Protein GI77459180 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGAC CGCAGACATT CAATACGCAA GAAGCTTTAC ACAAGGCAAT GGTCGTGTTC 
TGGCGCAAAG GTTATGAGGC AACTTCAATA ATTGACCTTC TCGGCGCCAC GGGGCTGAGC
AAAAGCAGTT TGTACGCAAC ATTTGGCGGC AAGCGCGAGT TATTTATTAT GGCGTTCGAC
GCCTATCGTC GTGAGCGAGC TAAAGACATG CATAGAGCCT TGCAGGACGG CCCTGCACGC
CTGTCTATCG AGTCGTTCTT CCGTTCTCTT TTTGCTGACC TTAATGACCC AAGTGAATCT
CATGGCTGCA TGAGCATCAA TCAAGCTGTA GAGATGGCGG CACATGATCT TGATGTCCGT
CAGAGGGTCA TGGAGGACTT TCGTCTCATT GAGGAGGCGT TGGAGAGGGC GATTGAGCGA
GGGCAACAAG ATGGATCATT GGGTAGTAAT CGGAATGCCC GAGAATTGGC CCGTCTGTTG
GTTCTGGCTT TTCCCGGACT GCAGGTCATG GCACGTGCTG GATACACGAA ACAAGATTTA
GAAAGTGCGC TGCACCTGCT GCTGTCGAAT TTGGATTTGT AA
 
Protein sequence
MSRPQTFNTQ EALHKAMVVF WRKGYEATSI IDLLGATGLS KSSLYATFGG KRELFIMAFD 
AYRRERAKDM HRALQDGPAR LSIESFFRSL FADLNDPSES HGCMSINQAV EMAAHDLDVR
QRVMEDFRLI EEALERAIER GQQDGSLGSN RNARELARLL VLAFPGLQVM ARAGYTKQDL
ESALHLLLSN LDL