Gene Pfl01_2944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2944 
Symbol 
ID3712512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3385914 
End bp3386951 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content61% 
IMG OID 
ProductDNA topoisomerase, type I, putative 
Protein accessionYP_348675 
Protein GI77459169 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGATA CTGCGCTCAC CGAGGTATTG CCTTCGGATC TGCATTACGT CGATGACACC 
CAGCCCGGTA TTAGCCGAAA AAAACTGCGC GGAAAATTTG CCTATTTCAA CCCCGAAGGC
CAGCGCATCA CCGATCCTGA CGAGATCAAG CGCATCAACT CGCTGGCCGT TCCACCGGCC
TACATCGACG TGTGGATCTG CGCCGACCCG CGCGGTCATC TGCAAGCCAC CGGCCGCGAT
GCCCGTGGGC GCAAGCAATA TCGCTATCAC GCTCGCTGGC GCGAGGTGCG CGACGCGGAC
AAGTATTCGC GTCTTCGTGA ATTTGGTCTG GCGCTGCCCA AACTGCGTAA ACAGCTGGAG
GCGCTGCTGG CCTCACCGGG CTTCAGTCGC GACAAAGTCA TGGCGACGGT CATCACGCTG
CTCGACGCCA CGCTGATCCG CGTCGGCAAC ACGCAATACG CGCGAGACAA TCGCTCCTAC
GGCCTGACCA CCCTGCGCAG CCGGCATGTC GAGGTCAACG GCAGCGCGAT CCTGTTCCAG
TTTCGCGGCA AGAGCGGCAT CGAACATCAG ATTACGGTGA AGGACCGGCG TCTGGCGCGA
ATCATCAAGC GCTGCCTTGA GATACCGGGG CAGAACCTGT TTCAGTATCT GGATGAAAAC
GGCGAGCGGC ACAGCGTCAG CTCTTCCGAC GTCAACGCCT ACCTGCAAAA CCTGACCGGT
GCGGACTTCA CTGCCAAGGA TTACCGGACC TGGGCCGGCA GCGCCCTCGC TTTGGCGGTT
CTGCGGGAGC TGCAATGGGA GTCCGAAACC GAGGCCAAGC GGCATGTGGT CGAGATGGTG
AAAGGCGTCG CCCGCCAACT GGGCAACACG CCGGCGGTCT GTCGAAAGTG CTACATCCAC
CCGGCGGTGG TCGAGCATTT CATGCTCGGC GCCTTGGCCG AGTTGCCGAA ACCGCGCATC
CGCAAGGGCC TGCGCAAGGA AGAAGTCGCA CTGGCGCTGT TTCTTGAACG GATGGTCGAG
CAGGCAGACA CGCCTTGA
 
Protein sequence
MPDTALTEVL PSDLHYVDDT QPGISRKKLR GKFAYFNPEG QRITDPDEIK RINSLAVPPA 
YIDVWICADP RGHLQATGRD ARGRKQYRYH ARWREVRDAD KYSRLREFGL ALPKLRKQLE
ALLASPGFSR DKVMATVITL LDATLIRVGN TQYARDNRSY GLTTLRSRHV EVNGSAILFQ
FRGKSGIEHQ ITVKDRRLAR IIKRCLEIPG QNLFQYLDEN GERHSVSSSD VNAYLQNLTG
ADFTAKDYRT WAGSALALAV LRELQWESET EAKRHVVEMV KGVARQLGNT PAVCRKCYIH
PAVVEHFMLG ALAELPKPRI RKGLRKEEVA LALFLERMVE QADTP