Gene Pfl01_2716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2716 
Symbol 
ID3714411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3132913 
End bp3133710 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content63% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_348447 
Protein GI77458941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.490599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAAC AATACAAAGG CACTGCGCTC ATCACCGGCG CGTCCACCGG CATCGGCTCG 
ATTTACGCCG AACACCTTGC CCGCCGGGGT TACGACCTCG TGCTGGTGGC GCGCAACCGC
GAACGTCTGA ACGCACTGGC CAGCCGCCTG ACCAGCGAAA CCCGGCAGAA CATCGAAGTG
TTGCAGGCCG ATCTTGGCCG CCCCGAGGAC CTCGCCAAGG TAGAACGCAA GTTGCGTGAG
GACGCCAGCA TCACTTTGCT GGTCAACAAT GCCGGCATCG GCACCCATAC CGGCCTGCTG
GAGAGTGATG TAGAGCGAAT GGCCGAGATG ATCACGCTGA ACGTCACCGC CCTCACCCGC
CTGACCTACG CCGCGATTCC AGGTTTTGTC GCCCGCGAAC GAGGCGCCGT GATCAATATT
TCCTCGATCG TCAGCCTGGC GCCGGAGCTG CTCAACGGCG TGTACGGCGG CAGTAAGGCC
TACGTCACCG CGTTCACCCA GTCCCTGCAC AAGGAACTCT CGGATAAAGG CATCCGGATC
CAGGCCGTCC TGCCCGGCGC AACCGCGACG GACTTCTGGC AAATCGGTGG ATTGCCTGTC
GAACATCTGG ATCCGGGCAT CGTGATGTCG GCCCAGGACC TGGTCGCCGG CGCTCTGCAG
GATTTCGACA ACGGCGTGCT GATCTCCATC CCCTCGATGC ACGACCTGCA AGGTTACGAG
CGTTACGAAG CCAGCCGCCA GGCCTTGTTC TCCGAGCTTT CGAGCAACCG GCTCGCGCCG
CGCTACAACG CCAACTGA
 
Protein sequence
MTQQYKGTAL ITGASTGIGS IYAEHLARRG YDLVLVARNR ERLNALASRL TSETRQNIEV 
LQADLGRPED LAKVERKLRE DASITLLVNN AGIGTHTGLL ESDVERMAEM ITLNVTALTR
LTYAAIPGFV ARERGAVINI SSIVSLAPEL LNGVYGGSKA YVTAFTQSLH KELSDKGIRI
QAVLPGATAT DFWQIGGLPV EHLDPGIVMS AQDLVAGALQ DFDNGVLISI PSMHDLQGYE
RYEASRQALF SELSSNRLAP RYNAN