Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2590 |
Symbol | |
ID | 3714191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2968297 |
End bp | 2969586 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_348321 |
Protein GI | 77458815 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.105703 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCATCCC AGATCGCCAT AGCGCTGCCG ACGCTTGCGA ATAACGCCGG ACAACTCGAC AAGACCTTTT CGAGCAACGG TGTTGCGCAG GTCTATTTCG CCGGCAGTAC GTCCAGCCTG ATCCAGAGCG TGGCGCTCGA CGCGCAGGGC AGGATCTTGG TCGCCGCCAA GGTGGGCACT GCTCAAGGCA GTTGTTTCGG TCTGGCCCGT CTGCTTGAGG ACGGCTCGGC GGATCTGGGG TTCGGCTTTC AAGGCAGCGT GATAGGCCGG TTCGCTGCCG GTTTCGAAGC CACCGGCGGC AAGGTTCAAG TCTTGCCCGA CGGGCGGATT CTGCTGGCGG GCCTGCACTA CGAATCAGAA CATCGCACCC TGCCCGCCCT GGCGATGTTC GATGTTCAGG GCCGAACTGA CCGGGATTTC GGTGACAACG GTCGACAGAT TGTCCGTCTG CCCGGCGACC TGTCCATGGG CACCCGCGAT GCCTGGCTCC CGCCAGGCGT TCCGGGCGCC GAAGCCTGCG ATTTCACGGT GCAGCCGGAC GGGCATATCC TGCTGATCGC CAACCATCAC TTCGAACTGG CCGACCACGT CGGCATGCTG ATCCGCCTCA AACCCGATGG CAGCCTCGAC CCGTCCTTCA ACGGTCGCGG GTTCGTCATG GTCCGTCACT TGCTGCTCAA TACCTGGCTC GGTGGCTTGC TGTTGCAAGA CGATGGACGC ATCGTAGTGG CCGGTTCCAT CGACTTCCCT CAGGAAGGCC TGCTCGCCCG CTACCTGCCG GACGGGCGGC TCGATGAACG TTTTGCGGTG GACGGTTTCA TGGCCTTCAA GGCCCAGGGG CACAGCACCC TGGTCAACCA AGTCATCGAA TCAGCGGAGC ATTTGCATTG TTTTGGCAGC AGCCGCGATC CGATTCGATG CATGGCGCTG TCTGTCCATG GCAACGGCCG CCCAGACCTG CACTGCAACG GTGGTCAGCC GCATCTTCTG GAAATCGGCC CCAGCGGCTG CCAGTGGAGC GCAGCGCAGG TGATGCCGGA CGGTCGCACC CTCGCGGTCG GCGCGACCAT CGGCGGGGTT GAAGCCGACT TCATCGTCGC CCGCTATCTG GCCAACGGCA GCCTTGATCG AAGCTTCGGT TCCGGTAATG GCTGGTTACG CACACGGCTG GGGCGCAGCC TCGATACCGC CACTTCGCTG GCGATCCAGC CGGGGGGCGA GATTCTGGTG GGCGGTTATT CGCTGGATGG CAACTACCGC GCAGTAGTCG CGCGTTATCT GAATCATTGA
|
Protein sequence | MSSQIAIALP TLANNAGQLD KTFSSNGVAQ VYFAGSTSSL IQSVALDAQG RILVAAKVGT AQGSCFGLAR LLEDGSADLG FGFQGSVIGR FAAGFEATGG KVQVLPDGRI LLAGLHYESE HRTLPALAMF DVQGRTDRDF GDNGRQIVRL PGDLSMGTRD AWLPPGVPGA EACDFTVQPD GHILLIANHH FELADHVGML IRLKPDGSLD PSFNGRGFVM VRHLLLNTWL GGLLLQDDGR IVVAGSIDFP QEGLLARYLP DGRLDERFAV DGFMAFKAQG HSTLVNQVIE SAEHLHCFGS SRDPIRCMAL SVHGNGRPDL HCNGGQPHLL EIGPSGCQWS AAQVMPDGRT LAVGATIGGV EADFIVARYL ANGSLDRSFG SGNGWLRTRL GRSLDTATSL AIQPGGEILV GGYSLDGNYR AVVARYLNH
|
| |