| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2577 |
|---|
| Symbol | |
|---|
| ID | 3714178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 2954639 |
|---|
| End bp | 2955355 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | DeoR family transcriptional regulator |
|---|
| Protein accession | YP_348308 |
|---|
| Protein GI | 77458802 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGCGAA CCACTCGCCT GTTGACCCTG CTGCAAGTGC TGCGTGGCAA GAAGCGCCCG
GTGACCGCAG CAACGCTGGC GTCCGAGCTG GAAATCTCCG AACGCACGCT CTATCGCGAC
ATCGCCGAAC TGACCGCACT CGGTGCACCG ATCCATGGCG AGGCGGGCAT CGGTTATGTG
TTGCGCAGCG GTCTGTTTCT GCCGCCGCTG ATGCTCAACG CCGACGAGAC CGAAGCCATC
GTGCTGGGCC TGCGTTATGT CGATCAGCGC GGTGACGAGG TGCTGAGCAA AGCCGCCGCC
GACGCGCTGG CGAAAATCGC TGCCGTGCTG GACCCCCAGG CCCAGGAGGC GCTGCGCAAT
CCAACCGTCA TGCCCGGGCC GCCGGGCTAC GGCTTTCCGC AAAACGCGGT GCCGTTGAAT
GTGTTCCGCC ATGCGATCCG CGATCAGGCC AAGCTGCACA TCGATTACGC CGATGCGCAG
CAGGTGCAGA GCCAGCGCTT GATCTGGCCG CTGGCGCTGG GCTTTCTCAA CGAGGTGCGG
ATCATCGTCG CGTGGTGCGA GTTGCGCGGC GCCTATCGCA CGTTTCGTAC CGACCGGATT
GCCGCCGCCA GTCTCCAGGG CGAGCGCTAT CCGGAGCGGC GCAGCGACCT ATTGCGCACC
TGGCAGCGGC TGATGCAATT GGACGAAAAC GGCCGTTTCA CTCCTGACAG GAATTGA
|
|---|
| Protein sequence | MSRTTRLLTL LQVLRGKKRP VTAATLASEL EISERTLYRD IAELTALGAP IHGEAGIGYV
LRSGLFLPPL MLNADETEAI VLGLRYVDQR GDEVLSKAAA DALAKIAAVL DPQAQEALRN
PTVMPGPPGY GFPQNAVPLN VFRHAIRDQA KLHIDYADAQ QVQSQRLIWP LALGFLNEVR
IIVAWCELRG AYRTFRTDRI AAASLQGERY PERRSDLLRT WQRLMQLDEN GRFTPDRN
|
|---|
| |