Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2539 |
Symbol | |
ID | 3714082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2906048 |
End bp | 2906809 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | LmbE-like protein |
Protein accession | YP_348270 |
Protein GI | 77458764 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.448814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGT TATCCCTCAG CGAGAGCGGC CTGCCGGCGC AGATCTGGAA CAGTGCCGCG CAGCTCGACA ACATTCCCGT CATCAACACC CACACATTGG TCCCACCCGG TGCCCGCGCC GTGGTCATCG CCCCGCACCC CGGCGATGAA GTGGTGACCT GCGGCGGCCT GCTGCAACTG CTTTCCAGCC TCGGCCATCC CTTGCAACTG CTGTCGATCA CCGATGGCAG CGCCAGTCAT CCGGGCTCGC GCCAGTGGTC GGAGAAACGC CTGAGCGTGT TTCGCCCGCA GGAGAGTGTC GAAGCCCTGC GCCGTCTGGG ATTGCCAATG CACAGCCTGA AATGGGTGCG CGGCGGTTTC ACCGACAATG CCCTGCACGA TCAGGAATCC CAACTCACCG ATTTCATCGC CCGCTACCTG CGCCCCGGCG ACGTGGTCTT CAGCACCTGG TGCCAGGACG GCACCGCCGA TCATGAAGTG GTCGGCCGGG CCAGCGCCAA AGCGGCACGA CAAGTCGGCG CCACCTACCA CGATGTGCCG GTCTGGGCCT GGCACTGGCC GGAACGGGAT CAGACGCAGA TCCCATGGCA TCGCGCGCGC AAGCTGCGCC TCGACACCTG GACCGTCGCG CGCAAGAGCC ACGCCACCCA CGCCTACGCC AGCCAGCTTA ATGGCGAACC GGCGATCGGT ATCGCGCCGC TGCTGCCCAA GTCGATTCTG GAACGCATGC GCCTGCCCTA CGAGATCATC TTCCTCGATT GA
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Protein sequence | MKPLSLSESG LPAQIWNSAA QLDNIPVINT HTLVPPGARA VVIAPHPGDE VVTCGGLLQL LSSLGHPLQL LSITDGSASH PGSRQWSEKR LSVFRPQESV EALRRLGLPM HSLKWVRGGF TDNALHDQES QLTDFIARYL RPGDVVFSTW CQDGTADHEV VGRASAKAAR QVGATYHDVP VWAWHWPERD QTQIPWHRAR KLRLDTWTVA RKSHATHAYA SQLNGEPAIG IAPLLPKSIL ERMRLPYEII FLD
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