Gene Pfl01_2495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2495 
Symbol 
ID3715276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2853054 
End bp2854337 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content60% 
IMG OID 
Productalanine racemase-like 
Protein accessionYP_348226 
Protein GI77458720 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.453866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTCA ATCGACGTAA TTTCGTGCTC GGAACTTTGG GTGTTGGCGC TTTGCTGGTG 
GGCGTGGGTG CGTTGTTAAG GCCGGGGGAT CGCGGCGGGC CTTACAGTGA CTATTTTCGG
GCGCTGAACA ACGAACTCAA GACCAAAGGC CCGATGCGCC CGGTGTTGCT GATCGATCTG
GATCGGCTGG ATCACAACAT CGACGTGGTG ATGCGCTCGG TCAAACGCGC GGGCAAGCAG
TTGCGGCTGG TAGAGAAGTC ATTGCCATCG CCGGGCTTGC TCCGCTACAT CGGCCAACGG
GCGGGGACGC AGCGGCTGAT GTCGTTCCAT CAGCCGTTTC TCAATCACGA TGCGGTGACG
TTTCCGCAGT CCGACATTCT GCTCGGCAAA CCGCTGCCGG TGCGCTCGGC CGAGATTTTC
TACCAGACTC ACAAAGGCCC CTTCGACCCG ACGAAACAAC TGCAATGGCT GATCGACAAC
CCCGAACGCT TGCAGCAATA CCTCGCACTG GCCCAGGGAT TTGGCACGCG GATGCGGATC
AACATCGAGC TGGACGTCGG CCTGCATCGA GGCGGCGTCA GTGACGTGAA CGTGCTCGGG
CAGATGCTCG CGCTGATCGC CGCCAACCCG CAGCATCTGG CGTTCGCCGG CTTCATGGGC
TACGACCCGT TCGTGGGCAT GGGCGTGCCG GGGATTCTCG GTTCGCCCGA GGAACTGTTC
GCCAAGGTGA TGGTGATTTA TCAGCGCTGC GTCGACTTCA CCCGGCAGCA ATATCCGGCG
CTGTGGCATG ACGGCTTGTG CCTGAATACG GCCGGCAGCC CGAGTTATCG CATGCATGAA
AACGAACACC TGAGCAGTGA GGTGTCGGTG GGGACGGCGA TGCTCAAGCC GACTCATTAC
GATCTGCCGT CGCTGGTCGA ACATGAACCT GCCGCGTACA TCGCCACGCC GGTGTTGAAA
AGCACGGGTG CGGTGAACAT CCCGGCGCTG GATGACAAGT CGAAACTGTT TTCGTGGTGG
GACACCAACC AGCGCCAGAC CTTCTTCATC TACGGTGGCA ACTGGATGGC CGAATTCGAA
TCGCCGCCCG GATTGCAGAG CAATGGTGTT TACGGCCGTA GCTCGAATCA GGAGATGGTC
AATGGCTCGA ATGCCGTGGG GCTGACGGTG GAGGATCAGG TGTTCTTGCG CCCGACCCAG
ACCGAAGCCG TCCTTCTGCA ATTCGGCGAC TTGCTGGCGG TGCGTGGCGG CAAGATCGTC
GATACCTGGC CGGTGTATAC CTGA
 
Protein sequence
MAVNRRNFVL GTLGVGALLV GVGALLRPGD RGGPYSDYFR ALNNELKTKG PMRPVLLIDL 
DRLDHNIDVV MRSVKRAGKQ LRLVEKSLPS PGLLRYIGQR AGTQRLMSFH QPFLNHDAVT
FPQSDILLGK PLPVRSAEIF YQTHKGPFDP TKQLQWLIDN PERLQQYLAL AQGFGTRMRI
NIELDVGLHR GGVSDVNVLG QMLALIAANP QHLAFAGFMG YDPFVGMGVP GILGSPEELF
AKVMVIYQRC VDFTRQQYPA LWHDGLCLNT AGSPSYRMHE NEHLSSEVSV GTAMLKPTHY
DLPSLVEHEP AAYIATPVLK STGAVNIPAL DDKSKLFSWW DTNQRQTFFI YGGNWMAEFE
SPPGLQSNGV YGRSSNQEMV NGSNAVGLTV EDQVFLRPTQ TEAVLLQFGD LLAVRGGKIV
DTWPVYT