Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2460 |
Symbol | |
ID | 3715317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2813677 |
End bp | 2814651 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | LysR family transcriptional regulator |
Protein accession | YP_348191 |
Protein GI | 77458685 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGAA ATGAACTCCG TCGTGTCGAC ATCAATCTGC TGGTGGTCTT CGAGACGCTG ATGCATGAGC GCAACGTCAG CCGGGTCGGC GAGAAACTGT TTCTCGGTCA ACCGACCATC AGTGCAGCGC TGGGGCGTTT GCGTGTGCTT TTCGACGATC CGTTGTTCGT TCGTGCGGGG AGGGTGATGG AACCGACAAG GCGGGCCGAG GAAATTTTCG CCAACCTGAC GCCGGCGCTG GATGGCGTTG TCGCGGCGTT GAGCCGTTGC CAGCCCTTCG CCCCAGCTAC CAGCGAGGTG ACCTTTCAGG TCGGCCTGTC CGACGATGTC GAATACGCGT TGCTCCCGCG ACTGCTGCGC CAGCTTCGTA GCGAGGCGCC GAATATTGCC TTGGTGGTGC TGCGCGTCGA TCAGCAGCAG ATGTCGCAGC GGCTGTTCAA TGGCGAGATT TCTCTGGGCA TCAGCCCTAC GCTCGATCTG CCGGCCAACG CTCGACGCAA GAGTCTACGG TCGATCCGGC CAATGCTCCT GCGCTCGGAT ACCCGCCCGG GCCTGCTGGC GCTCGATGAG TTCTGCGAGC GCCCGCATGC CATCGTGTCG TCCATGGGCA AGGCCAGGGA TGACACCGAC CACGCGCTGG ACCTGCTTGG ACGTCGGCGC AAAGTGGTGC TGGCAGTGCC GCAGTTCAGT GCCTTGCCAA GGTTGTTGGC GCAGAGCGAC ATGCTGGTCA TCGTTCCGGA TTACGTGGCC AGGGCCATGG CCTCGGTGAA TGGCATCAGG GCCGAGCCGG CCCCTCTGTT GCTGCCATCG CGGGAGCTTT CCATGGTCTG GCGTGCCGCT GCGCACAACG ATTGCGCTCA GCGTTGGCTG CGTTCGCGTT GCCAGGCATT TCTTGGCACG CCGATTGAGT TGCAGGTAGT GCCAAAATTA CGCCCCGCGT TGCCCGTCGA TCAGACGTTG ATGATGGCCC GGTAG
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Protein sequence | MNRNELRRVD INLLVVFETL MHERNVSRVG EKLFLGQPTI SAALGRLRVL FDDPLFVRAG RVMEPTRRAE EIFANLTPAL DGVVAALSRC QPFAPATSEV TFQVGLSDDV EYALLPRLLR QLRSEAPNIA LVVLRVDQQQ MSQRLFNGEI SLGISPTLDL PANARRKSLR SIRPMLLRSD TRPGLLALDE FCERPHAIVS SMGKARDDTD HALDLLGRRR KVVLAVPQFS ALPRLLAQSD MLVIVPDYVA RAMASVNGIR AEPAPLLLPS RELSMVWRAA AHNDCAQRWL RSRCQAFLGT PIELQVVPKL RPALPVDQTL MMAR
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