Gene Pfl01_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2428 
Symbol 
ID3715324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2780846 
End bp2783395 
Gene Length2550 bp 
Protein Length849 aa 
Translation table11 
GC content46% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348159 
Protein GI77458653 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0793097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGC ATAGTGATGC AACAGGTTAC CTTTTAGCTC ACAGAGATTC AGTCAACGAA 
GCGTGGTTTC ACGCGGTGTG CGAAGCAGCA ATAAACTCAC TTGGAGGAAA CCTCTCTCCA
AACGAACTTG AGCGTCTCTG GAGGCTTTTT TGCGGACTAG AAACCTTTGC ACCAGTGGCA
ACTACTCCCC CTGCGCTGAA GACAAATGCA CGTAATGCGA TCCAACCGTT TCATCTGGAG
ACTCTGTCGG ATTTCTCCGG ATTCAAGAAG TTGAGTGGCA CGCTGAGGCT GGATTTATCG
AAACGTATTA CACTGGTTTT TGGTCGAAAT GGGGCAGGGA AATCGAGCTT ATGTCAGGCT
CTTAAAATTT TGGCAAATCC AGAGAAGCCG AAAGAACCTC TGAATAATGT TCGCTCTTCT
AGCAAAAATA TTCCTTCCTT TAGTTATAAG CTACGGGGTG GCTCAGTAGA AAATTGGACT
GAGTTGGACG GGTTTGGTGG GCAGTCTCAG GCACTAAAAT ATTTTGATTC GGCTGTCGCT
CATAAACATA TAAATAGTTC AATTTCACCA GAAGCGGTAG TGGAGTTAAG TGCGTTTCGA
CTAGAGTGTT TCGACTATGC TCGGGAGTAT TTGAAACAGT TTCAGGCTTA CGGTGTGTCT
AAGGTTTTGG AGTGCCGGCA AGATACCGAT AAGAAAATTT CTGAAATTAA GCTGAGCGTT
CATGCAGTTA TAGATACAAA TACTGGAGTT TTTAAGGATT GGAGTGCAAT TAATTGCCAG
CCTATGCTTT CTTGGATAGG AACGGTGAGC TTTGGTGAGG AGAGGCGCCT TCAAAAGACA
GAAAAGCAGG CAAGGTTGGA ACAACTTAGG GGGGCGACGA GCGCTGAGGG TCAGCAAGCC
CTCAGTCTGA AAAAAAGTTT GCTAGGCCAA ATAAAACAAT CGTTATCAAA TTTTGTTCAG
CAATGTATAG GTTTTTCATA TCCTGCCTAT AGCCAGATAC TTTTTTCAAT CCAGCAAAAA
CAGGCTGCAA GCGTTGAGTT GGCAGGTGTT GTGTTCTCCA AAGAATTGGA TGTGACGGGG
CAACAGAGGC TTCTATTTGC AGCTGCTGCA TTACGGCCAT TTGTTCCCGC TGAGACCTGT
CCGTTATGTC GCCAAAAACT AGAGGGTCAA GCTAATGCGC TCTTCCACGC CTTCCATAAT
CACTTGACTT CAACTATGCA AACGGAGCTT TCCGTACTAA ATGTTCAGCA GAAGGATGAG
CAATCCAAGA AAGAAATGAT CGAGAGCTTC GCAGAGATAA ATTATTCACA GTATTCGAGT
GTTTTGGATA TTGATTTCCT GCGTGCTGTT TCAGATCTTA TCAAATTGGT CAAGGCTTCA
TTGCAAGTGC CTGTAATTGA TCAGGCTGCG CTCGGCAATT ATTCTCGGTA TATCGAGCTG
AACTCTTTCG TTGAGACTAT AAATGCAGAA CACAACAAGG TAGCCTCAGC TTTGACGTTG
GCGTCGAATG GATTGCAAGC TCTAAACGAG GAAATTTCAA AGCTCACAAC TGAAATTGGT
GCGCTCAGCA TAGACGAAGT CGCATATTCC GTGCGTCCTC AAATCGAGGC GATATGCCAA
AACGCAATCC ACTTTGCAAG CGCCGCCAAT AGTGTGGAGT CTTATAACTT CACTTCGCGC
CTGTCAGCGT TGACCGCACG AAAGAAGGAT GCGCATACAG CGCTGGTGCT AAGTTCATTT
GTACCGTATT TGGACGCCGA GTATCGGAGA CTTTGTGGTG CCTCGCTTGA GCAAATCGGT
GTGCGCCTTG CTAACCAAGG GGCTGATGCG ATAGTGCTCC CGAAGATTGG TGATGAGCTG
GTGCATCGCG TGCTGAGTGA AGGTGAACTC AAGATTCACG CGCTTGCCCT GTTCATGTGT
GAGGCAACGG TCGCACCGCA TCAGGTTCTG GTTCTAGATG ATCCAGTGAC CAGCTTTGAC
TACAACTATA TTTCTAATTT TTGTGAGCGT CTGCGTGACT ACGCTAAAGA CAATACACAA
TCACAACTCA TCGTACTGAC ACACAATTGG GACTTCTTTG CGAACCTCCA GGCTACTTTA
AATGGCTCGG GCCTGAGTGG ATCCTTCTCA GTGCAAGTGC TGGAAGACTG TTCGACGGTG
TCCGAATACG TAGAGAAGTG GGAGGAGTTG TGTTTGCAGA TTGATGGCTA CATTGACCCG
CAGATAGAGA TCAGCCCTGA TGAAAAATCC AAGCTTTCTG CTCTGCTAAG GCGTTTGGTG
GAGAGACTTA CGAATGCATA TGTGTTCAAT GAACAACGCC ACCAGTACAA AATCAGAGCG
TTGCAGGTCT CCAACTTTAA GGAGTTTGTG AAACTGGTGC CATTGCTTCC GGCAGAGGCG
GACAGACTTA AAGATTTGTA TGCCAATCTG AGCCCGCTTG AACATGATGA TATACGAAAC
TATTATTCCA CTAAGTCTAT ATATCAATTT GGCAGTTGGT ATGATGAGAT TAAGTCAATA
AAAAATGCAG TTGAGGCGCG TCGTACTTAG
 
Protein sequence
MAAHSDATGY LLAHRDSVNE AWFHAVCEAA INSLGGNLSP NELERLWRLF CGLETFAPVA 
TTPPALKTNA RNAIQPFHLE TLSDFSGFKK LSGTLRLDLS KRITLVFGRN GAGKSSLCQA
LKILANPEKP KEPLNNVRSS SKNIPSFSYK LRGGSVENWT ELDGFGGQSQ ALKYFDSAVA
HKHINSSISP EAVVELSAFR LECFDYAREY LKQFQAYGVS KVLECRQDTD KKISEIKLSV
HAVIDTNTGV FKDWSAINCQ PMLSWIGTVS FGEERRLQKT EKQARLEQLR GATSAEGQQA
LSLKKSLLGQ IKQSLSNFVQ QCIGFSYPAY SQILFSIQQK QAASVELAGV VFSKELDVTG
QQRLLFAAAA LRPFVPAETC PLCRQKLEGQ ANALFHAFHN HLTSTMQTEL SVLNVQQKDE
QSKKEMIESF AEINYSQYSS VLDIDFLRAV SDLIKLVKAS LQVPVIDQAA LGNYSRYIEL
NSFVETINAE HNKVASALTL ASNGLQALNE EISKLTTEIG ALSIDEVAYS VRPQIEAICQ
NAIHFASAAN SVESYNFTSR LSALTARKKD AHTALVLSSF VPYLDAEYRR LCGASLEQIG
VRLANQGADA IVLPKIGDEL VHRVLSEGEL KIHALALFMC EATVAPHQVL VLDDPVTSFD
YNYISNFCER LRDYAKDNTQ SQLIVLTHNW DFFANLQATL NGSGLSGSFS VQVLEDCSTV
SEYVEKWEEL CLQIDGYIDP QIEISPDEKS KLSALLRRLV ERLTNAYVFN EQRHQYKIRA
LQVSNFKEFV KLVPLLPAEA DRLKDLYANL SPLEHDDIRN YYSTKSIYQF GSWYDEIKSI
KNAVEARRT