Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2428 |
Symbol | |
ID | 3715324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2780846 |
End bp | 2783395 |
Gene Length | 2550 bp |
Protein Length | 849 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_348159 |
Protein GI | 77458653 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0793097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCGC ATAGTGATGC AACAGGTTAC CTTTTAGCTC ACAGAGATTC AGTCAACGAA GCGTGGTTTC ACGCGGTGTG CGAAGCAGCA ATAAACTCAC TTGGAGGAAA CCTCTCTCCA AACGAACTTG AGCGTCTCTG GAGGCTTTTT TGCGGACTAG AAACCTTTGC ACCAGTGGCA ACTACTCCCC CTGCGCTGAA GACAAATGCA CGTAATGCGA TCCAACCGTT TCATCTGGAG ACTCTGTCGG ATTTCTCCGG ATTCAAGAAG TTGAGTGGCA CGCTGAGGCT GGATTTATCG AAACGTATTA CACTGGTTTT TGGTCGAAAT GGGGCAGGGA AATCGAGCTT ATGTCAGGCT CTTAAAATTT TGGCAAATCC AGAGAAGCCG AAAGAACCTC TGAATAATGT TCGCTCTTCT AGCAAAAATA TTCCTTCCTT TAGTTATAAG CTACGGGGTG GCTCAGTAGA AAATTGGACT GAGTTGGACG GGTTTGGTGG GCAGTCTCAG GCACTAAAAT ATTTTGATTC GGCTGTCGCT CATAAACATA TAAATAGTTC AATTTCACCA GAAGCGGTAG TGGAGTTAAG TGCGTTTCGA CTAGAGTGTT TCGACTATGC TCGGGAGTAT TTGAAACAGT TTCAGGCTTA CGGTGTGTCT AAGGTTTTGG AGTGCCGGCA AGATACCGAT AAGAAAATTT CTGAAATTAA GCTGAGCGTT CATGCAGTTA TAGATACAAA TACTGGAGTT TTTAAGGATT GGAGTGCAAT TAATTGCCAG CCTATGCTTT CTTGGATAGG AACGGTGAGC TTTGGTGAGG AGAGGCGCCT TCAAAAGACA GAAAAGCAGG CAAGGTTGGA ACAACTTAGG GGGGCGACGA GCGCTGAGGG TCAGCAAGCC CTCAGTCTGA AAAAAAGTTT GCTAGGCCAA ATAAAACAAT CGTTATCAAA TTTTGTTCAG CAATGTATAG GTTTTTCATA TCCTGCCTAT AGCCAGATAC TTTTTTCAAT CCAGCAAAAA CAGGCTGCAA GCGTTGAGTT GGCAGGTGTT GTGTTCTCCA AAGAATTGGA TGTGACGGGG CAACAGAGGC TTCTATTTGC AGCTGCTGCA TTACGGCCAT TTGTTCCCGC TGAGACCTGT CCGTTATGTC GCCAAAAACT AGAGGGTCAA GCTAATGCGC TCTTCCACGC CTTCCATAAT CACTTGACTT CAACTATGCA AACGGAGCTT TCCGTACTAA ATGTTCAGCA GAAGGATGAG CAATCCAAGA AAGAAATGAT CGAGAGCTTC GCAGAGATAA ATTATTCACA GTATTCGAGT GTTTTGGATA TTGATTTCCT GCGTGCTGTT TCAGATCTTA TCAAATTGGT CAAGGCTTCA TTGCAAGTGC CTGTAATTGA TCAGGCTGCG CTCGGCAATT ATTCTCGGTA TATCGAGCTG AACTCTTTCG TTGAGACTAT AAATGCAGAA CACAACAAGG TAGCCTCAGC TTTGACGTTG GCGTCGAATG GATTGCAAGC TCTAAACGAG GAAATTTCAA AGCTCACAAC TGAAATTGGT GCGCTCAGCA TAGACGAAGT CGCATATTCC GTGCGTCCTC AAATCGAGGC GATATGCCAA AACGCAATCC ACTTTGCAAG CGCCGCCAAT AGTGTGGAGT CTTATAACTT CACTTCGCGC CTGTCAGCGT TGACCGCACG AAAGAAGGAT GCGCATACAG CGCTGGTGCT AAGTTCATTT GTACCGTATT TGGACGCCGA GTATCGGAGA CTTTGTGGTG CCTCGCTTGA GCAAATCGGT GTGCGCCTTG CTAACCAAGG GGCTGATGCG ATAGTGCTCC CGAAGATTGG TGATGAGCTG GTGCATCGCG TGCTGAGTGA AGGTGAACTC AAGATTCACG CGCTTGCCCT GTTCATGTGT GAGGCAACGG TCGCACCGCA TCAGGTTCTG GTTCTAGATG ATCCAGTGAC CAGCTTTGAC TACAACTATA TTTCTAATTT TTGTGAGCGT CTGCGTGACT ACGCTAAAGA CAATACACAA TCACAACTCA TCGTACTGAC ACACAATTGG GACTTCTTTG CGAACCTCCA GGCTACTTTA AATGGCTCGG GCCTGAGTGG ATCCTTCTCA GTGCAAGTGC TGGAAGACTG TTCGACGGTG TCCGAATACG TAGAGAAGTG GGAGGAGTTG TGTTTGCAGA TTGATGGCTA CATTGACCCG CAGATAGAGA TCAGCCCTGA TGAAAAATCC AAGCTTTCTG CTCTGCTAAG GCGTTTGGTG GAGAGACTTA CGAATGCATA TGTGTTCAAT GAACAACGCC ACCAGTACAA AATCAGAGCG TTGCAGGTCT CCAACTTTAA GGAGTTTGTG AAACTGGTGC CATTGCTTCC GGCAGAGGCG GACAGACTTA AAGATTTGTA TGCCAATCTG AGCCCGCTTG AACATGATGA TATACGAAAC TATTATTCCA CTAAGTCTAT ATATCAATTT GGCAGTTGGT ATGATGAGAT TAAGTCAATA AAAAATGCAG TTGAGGCGCG TCGTACTTAG
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Protein sequence | MAAHSDATGY LLAHRDSVNE AWFHAVCEAA INSLGGNLSP NELERLWRLF CGLETFAPVA TTPPALKTNA RNAIQPFHLE TLSDFSGFKK LSGTLRLDLS KRITLVFGRN GAGKSSLCQA LKILANPEKP KEPLNNVRSS SKNIPSFSYK LRGGSVENWT ELDGFGGQSQ ALKYFDSAVA HKHINSSISP EAVVELSAFR LECFDYAREY LKQFQAYGVS KVLECRQDTD KKISEIKLSV HAVIDTNTGV FKDWSAINCQ PMLSWIGTVS FGEERRLQKT EKQARLEQLR GATSAEGQQA LSLKKSLLGQ IKQSLSNFVQ QCIGFSYPAY SQILFSIQQK QAASVELAGV VFSKELDVTG QQRLLFAAAA LRPFVPAETC PLCRQKLEGQ ANALFHAFHN HLTSTMQTEL SVLNVQQKDE QSKKEMIESF AEINYSQYSS VLDIDFLRAV SDLIKLVKAS LQVPVIDQAA LGNYSRYIEL NSFVETINAE HNKVASALTL ASNGLQALNE EISKLTTEIG ALSIDEVAYS VRPQIEAICQ NAIHFASAAN SVESYNFTSR LSALTARKKD AHTALVLSSF VPYLDAEYRR LCGASLEQIG VRLANQGADA IVLPKIGDEL VHRVLSEGEL KIHALALFMC EATVAPHQVL VLDDPVTSFD YNYISNFCER LRDYAKDNTQ SQLIVLTHNW DFFANLQATL NGSGLSGSFS VQVLEDCSTV SEYVEKWEEL CLQIDGYIDP QIEISPDEKS KLSALLRRLV ERLTNAYVFN EQRHQYKIRA LQVSNFKEFV KLVPLLPAEA DRLKDLYANL SPLEHDDIRN YYSTKSIYQF GSWYDEIKSI KNAVEARRT
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