Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2401 |
Symbol | |
ID | 3715394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2762430 |
End bp | 2763050 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_348133 |
Protein GI | 77458628 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00829988 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCATCG CCGACAACCT ACTCGCCTTC ACCCTCGCCG CCACCCTGTT GACCCTGACG CCCGGTCTCG ACACCGCGCT GGTGCTGCGC ACCGCCACCG TCGAGGGCAA ACAGCAGGCG TTGCGAGCAG CATTGGGGAT CAACGTCGGT TGTCTGTTGT GGGGCGCGGC GGTGGCGTTT GGGTTGGGGG CGTTGATTGC GGTGTCGGAG CTGGCCTACA ACCTGTTGAA GTATTGCGGC GCGGCGTATC TGGCGTGGCT GGGGTTGAAC ATGCTGCTGC GCCCTCGCCG TTCGCTGGCA CCGGCCGAGG CTGACGGCAA GCCGGGGGCG AACTGGTTTT TCAAGGGCAT GCTGGGGAAC GTGCTGAATC CGAAGATCGG GATTTTCTAC GTGTCGTTTC TGCCACAGTT CATTCCGCAA GGTCAGCCGC TGGTGCCTTG GACGTTCGGG CTGGTGAGCA TTCATGTGGT GCTCGGGCTG ATCTGGTCGC TGGTGCTGAT TGGCGCGACA CAGCCGCTGT CCGGTTTCCT TCGCCGCGAG AAGGTGATTC GCTGGATGGA TCGCACCACC GGGATGATTT TCGTGTTGTT TGCTGCGCGG CTGGCGTTCA GCAAGCGTTG A
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Protein sequence | MSIADNLLAF TLAATLLTLT PGLDTALVLR TATVEGKQQA LRAALGINVG CLLWGAAVAF GLGALIAVSE LAYNLLKYCG AAYLAWLGLN MLLRPRRSLA PAEADGKPGA NWFFKGMLGN VLNPKIGIFY VSFLPQFIPQ GQPLVPWTFG LVSIHVVLGL IWSLVLIGAT QPLSGFLRRE KVIRWMDRTT GMIFVLFAAR LAFSKR
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