Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2384 |
Symbol | |
ID | 3715436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2743845 |
End bp | 2745155 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | major facilitator transporter |
Protein accession | YP_348116 |
Protein GI | 77458611 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000340178 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | ATGACACCGC GTTTGCTGGC CATGGCGCTG GCGCCCCTGC TCGGGCTGTT CATTGTTGCG CTGGGCAACG GCTTTCTGTC TTCTTTGACC ACCCTGCGTT TGGGCGCTGC CGGCGAATCG GCGACGATGA TCGGCATCGT GTCCTCGGCC TATTTCATCG GCCTGACGCT GGGCGCGATC TTCAACGACC GGCTGATCCT GCGCATCGGC CACATCCGCG CCTACAGCAG CTTCGCCTCG CTGATCGCCG CGACCATCCT GTTGCAAGGG CTGTTTTATG ACACCTGGGG CTGGGTCGTG CTGCGCCTGA TCAACGGTTG GGCCACGGTC GGTGTATTTC TGGTGATCGA GAGCTGGCTG CTGCTGGCCG GTGACGCGAA GATTCGCGGC CGCCTGCTGG CGCTGTACAT GATCGTCCTC TACGGCGCCG GCGTGCTGGG TCAGGCGTTT TTGGGGAAAA TCACCGGGCT GGGCGACACC GCGCCGTTCA TGGTCGCCGG CATGCTCGCA ACCCTGTCGG TGCTGCCGAT CGTGATCCTG CCGCGGGTTT CGCCGCTGCT GGAACAGGTC GAACCGCTCA AGCCTCGGGC CTTGCTTGGC GTTTCGCCCA CCGGGTTGGT CGGCTGCTTC GGCTCCGGCG TGACCATCGC GGCGATCTAC ACCCTGCTGC CGCTGTACCT GCAACGCATC GGCCTGAACG TGGGCGAAGT CGGCAGCATG ATGGCGTGGA CGATCCTCGG CGCAATGCTG CTGCAATACC CGGTCGGGCG CTGGTCCGAC CGCAAGGATC GCCTGCAAGT GCTCACCGTG CTCTGCGCCG CGTGCACCGT TCTGTCGCTG GTGATCGTGC TGGTGCCGCT GTCCTCGGCC CTGCTCGCGG CGATGCTGTT CCTGTTAGGT GGCGGCGTGT TCGCGCTGTA CCCGGTTGCG GTCAGCCATG CGGCCGACCG TGCGCCGGTC GAAACGTTGG TGCCGATGAT TCAGGGCATG TTGCTGATCA ACTCGCTGGG CTCGGCGATG AGCCCGCTGC TGATCTCGCC GGCGATGAAT GCCCATGGCG AAACCGGCCT GTTCTGGGCC TTCGCGCTGG TCAACCTGGC CATGGTGACG TTCTTCTTCT GGCGTCGCGG CAAGCGTCCG GTGCCGGCCA ATCCGGCACC GTTTGCGGCG GCAGCGACCT TCTCGCCAAC CGGCGCAGAG CTGCGAGTGA CCGAGGATCT GCGTCAGGCC GCGCAGGACC ATCCGCCGAT GGTCGATGCG TTGAGCGGCG AAGCGGCGCC GGCAACGGGA TCGCGCTACG AAGCCAGTTG A
|
Protein sequence | MTPRLLAMAL APLLGLFIVA LGNGFLSSLT TLRLGAAGES ATMIGIVSSA YFIGLTLGAI FNDRLILRIG HIRAYSSFAS LIAATILLQG LFYDTWGWVV LRLINGWATV GVFLVIESWL LLAGDAKIRG RLLALYMIVL YGAGVLGQAF LGKITGLGDT APFMVAGMLA TLSVLPIVIL PRVSPLLEQV EPLKPRALLG VSPTGLVGCF GSGVTIAAIY TLLPLYLQRI GLNVGEVGSM MAWTILGAML LQYPVGRWSD RKDRLQVLTV LCAACTVLSL VIVLVPLSSA LLAAMLFLLG GGVFALYPVA VSHAADRAPV ETLVPMIQGM LLINSLGSAM SPLLISPAMN AHGETGLFWA FALVNLAMVT FFFWRRGKRP VPANPAPFAA AATFSPTGAE LRVTEDLRQA AQDHPPMVDA LSGEAAPATG SRYEAS
|
| |