Gene Pfl01_2242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2242 
Symbol 
ID3715661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2571829 
End bp2573088 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content57% 
IMG OID 
ProductSodium:dicarboxylate symporter 
Protein accessionYP_347974 
Protein GI77458469 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTA TTCCCCTGGT GTGGCAAATC GTTGCCGGGC TGTTGCTTGG CGTGCTCGTT 
GGTTGGTACT TCAACACCCA TCCGCAGTAT CAGTCGTGGG TCAGTGCGGA GATCCTGAAA
CCGCTTGGCG ATATCTTCAT CAAGATGATG AAGATGGTGG TCGTGCCCAT CGTGTTGTGT
TGCATGATCC TGGGTATCGC CGGTGGCGGG GATAACAAGT CGTTCGGCCG GATGGGCATC
AAGTCGCTGG GCTATTTCTT TGCGATCACC GGCCTGGCCA TCGTGATCGG CCTGTGTTTC
GCGAACCTCT TCGAACCCGG TACGGGCACC GATATTTCGG GCATCGCGCA TGGTGCTACC
GCCATCACGA TGGAGCCTTC GAAGGGCGCG CTCGTGATTA TGCAAAACAT CGTTCCGGAT
AACGTTCTGG TGGCGATGTC CGAGGCGAAG CTGCTTTCGG TCCTGTTCTT CGCGGTGTTG
TTCGGTGTCG CGCTGAACGC ATTGCCCAAG GAAAAAAGTG CACCTGTGGT TGCGCTGGTC
CAAGGCATTT CGGATGCGAT GTTCAGGATC GTCTCGATCG TCATGGCCTA TGCCCCGATA
GGGGTGTTCG GCATGATCGG TGCGACCGTC GCGACCTTCG GTTTTGCCTC GTTGTTGCCC
CTGCTCAAGT TGATTGGTGT GGTTTATCTG GCGCTGATCG TCTTCGCATT GGTAGTGCTC
GGAGGAATCA GTTACCTGAT CGGCGAGAAC ATCTTCAAGT TGATCAGGTA TTTCCGCGAC
GAGTTGATTC TTGCGTTCTC CAGTGCTGCC TCTGCAGCGG TCATGCCGCA GTTGATGAGC
AAGCTGGAGA ACTACGGCGT ACCACGGCGC ATTGTCAGTT TTGTGGTGCC AGTGGGGTAC
GCGTTCAACC TTGATGGCGC GTCGATCTTC CTCGGGGTGG CGACAATCTT TATCGCCCAG
CTTTATGGAA TCGATCTGTC GCTTTCTCAG GAAATCCTGC TGGTGGTGAC CATGGTGCTG
ACCTCCAAAG GTGCTGCCGG GGTGCCTGGA TTCGCCATCG TCATCCTGTC GGCCACATTG
GCGTCTGCCG GTCTTCCGCT GGAGGGCGTG GCACTGATCG CCGGCATCTT CAGGATTATC
GACAGCGGCA CCACCACCCT GAATGTGTTG GGCAATGCGA TCGCGCCCCT GGTGATCGCC
AAATGGGAGA GGGTGACTCT TGAGCCTTCG CGCACCCGCC CGGACGTACA AAAGGCCTGA
 
Protein sequence
MKRIPLVWQI VAGLLLGVLV GWYFNTHPQY QSWVSAEILK PLGDIFIKMM KMVVVPIVLC 
CMILGIAGGG DNKSFGRMGI KSLGYFFAIT GLAIVIGLCF ANLFEPGTGT DISGIAHGAT
AITMEPSKGA LVIMQNIVPD NVLVAMSEAK LLSVLFFAVL FGVALNALPK EKSAPVVALV
QGISDAMFRI VSIVMAYAPI GVFGMIGATV ATFGFASLLP LLKLIGVVYL ALIVFALVVL
GGISYLIGEN IFKLIRYFRD ELILAFSSAA SAAVMPQLMS KLENYGVPRR IVSFVVPVGY
AFNLDGASIF LGVATIFIAQ LYGIDLSLSQ EILLVVTMVL TSKGAAGVPG FAIVILSATL
ASAGLPLEGV ALIAGIFRII DSGTTTLNVL GNAIAPLVIA KWERVTLEPS RTRPDVQKA