Gene Pfl01_2210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2210 
Symbol 
ID3715712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2495895 
End bp2496689 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content62% 
IMG OID 
ProductLuxR family transcriptional regulator 
Protein accessionYP_347942 
Protein GI77458437 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGA CCGGCAGTCT TCGCAACATG GAAAATCCGC ACTTTTATTG GCAGTTGGGG 
GAGTTGATCG CCAGCACCGG CAACGAGCGT TTTGCCACGA ACATGTTCCA GCTGGTCGAC
AACCTTGTGC CGGTCAATCG CGTCCATCTC AGTGAGTGGA CCCTGGATGA ACGGGAGTCC
AGCGTGGTCG AGATCAAGGC GTTGGGCAGC GCGGGGTTGC CGGACACCTT CCCGCCCCCG
GATCCGCTGC AGCACCCGGA CGACCATCCG CTGCTGCAAC AGATGATCGA GATGAACGAC
TCGCTACTGA TTCAACTGAA AGCCTCGCTC CAGCATCGGC ATCCGCACCA CAGTGTCCAC
CAATGCAATC TGGTGTCCCG CACGTCCAAC CGCCGTTGCG TTATCTCGTT CTACCGTCCC
CACACGCATC GGGTGTTCTC TCTGCCGGAG CTGTCGTTCC TCAAGCGCCT GTCCGACACC
CTGCTGCCCT TGATCGAGCG CCACGCGCAC ATCAGTCGAC AAGCCATCGC CCGCCAACCC
CGCGCGCCAC AAGCCGATCA ACCACAGACG CCGCTGCAAC AGGTGTTCGA CGAACGCCTG
GCGTTGGGCG ACATCACCTT GTCAGTGCGT GAGAAAGAGG TCTGCCTGGG CCTGCTGACC
GGCGGCACCG TGCCGCAGAT GGCCGAACGG TTGCGGGTCA AGAACAGCTC GATCGAGACC
TACCTCAAGC GCGCGGCCGC CAAGCTTGGG GTCAGCGGCC GTCACGGTCT GGCGAAATGG
ATGGCCGGAG CCTGA
 
Protein sequence
MNLTGSLRNM ENPHFYWQLG ELIASTGNER FATNMFQLVD NLVPVNRVHL SEWTLDERES 
SVVEIKALGS AGLPDTFPPP DPLQHPDDHP LLQQMIEMND SLLIQLKASL QHRHPHHSVH
QCNLVSRTSN RRCVISFYRP HTHRVFSLPE LSFLKRLSDT LLPLIERHAH ISRQAIARQP
RAPQADQPQT PLQQVFDERL ALGDITLSVR EKEVCLGLLT GGTVPQMAER LRVKNSSIET
YLKRAAAKLG VSGRHGLAKW MAGA