Gene Pfl01_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_2148 
Symbol 
ID3715845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2431181 
End bp2432023 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content66% 
IMG OID 
Productformate dehydrogenase, subunit FdhD 
Protein accessionYP_347880 
Protein GI77458375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTGCC AAGTTGAACA ACTCATCGAA CCGGGCGACG CCAACGCCCC CGCGCCACAA 
CCGGCGCAAG TGGCGTACCG CGAATACCTC GACGACGCGC CGGTGTCCCA CGCGGCGCTG
GCGGCCGAAA TCGCGCTAGC CATCAGCTAC AACGGACTGA ATCAGGCGGT GATGATGGTC
TCGCCGGGCA ACATCGAGGA CTTCATTCGC GGCTTCAGCC TGAGCAACGC CATTGTCGAC
CGCCTCGACG ATATCCACGA CATCCGCCTG ACCCATTTCG ACCAGGCCTG CCAGGCCGAC
GTGCAGATTT CCAGCCGCGC GTTCTGGGCT CTGAAGGATC ATCGCCGGCA GATGGCGGGC
ACCAGCGGCT GCGGCCTCTG CGGCGTGGAA GCCCTTGAGC AGGCGCTGCC GCAACTGGAG
ATCCTGACCC CGACACCGTT GCCACCCGCC GCGCATTTCA ACGGCATCCG CCAGCGCATC
GAGCAGGCCC AGCAACTGGC CCGCAGCAGC GGTGCCCTGC ACGCGGCGCT GTACTTCGAC
GCCGACGGCG AAGCACTGCT GTGCCGCGAA GACATCGGCC GCCACAACGC CCTCGACAAG
CTGATCGGCG CCTTGCAATT CGAAGGCCTC GATGCGCGCC AGGGCTTCGT CGTGGTCACC
AGCCGTTGCA GCCTCGAACT GATCCACAAA GCCGTGCGCG CACGCCTCGG CACCCTCGTC
AGCCTGTCCG CCCCTACTGC ACTTACGGTG CGCTGGGCGC TCAAGCACCG CCTGAACCTG
ATCCACGTCC CGCACCGCAA TGCCCCGCGA GTCTACAGCC CGATCCAGGA GCCCACCGCA
TGA
 
Protein sequence
MLCQVEQLIE PGDANAPAPQ PAQVAYREYL DDAPVSHAAL AAEIALAISY NGLNQAVMMV 
SPGNIEDFIR GFSLSNAIVD RLDDIHDIRL THFDQACQAD VQISSRAFWA LKDHRRQMAG
TSGCGLCGVE ALEQALPQLE ILTPTPLPPA AHFNGIRQRI EQAQQLARSS GALHAALYFD
ADGEALLCRE DIGRHNALDK LIGALQFEGL DARQGFVVVT SRCSLELIHK AVRARLGTLV
SLSAPTALTV RWALKHRLNL IHVPHRNAPR VYSPIQEPTA