Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_2024 |
Symbol | |
ID | 3716073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 2307302 |
End bp | 2308654 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | UDP-glucose/GDP-mannose dehydrogenase |
Protein accession | YP_347756 |
Protein GI | 77458251 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGTGA GCGTATTTGG TACGGGCTAT GTTGGCCTGA TACAAGCAGC CGCACTTGCC GATGTCGGAC ATCGCGTATT GTGCGTCGAT ATTGACCCGA ACAAGATTAA ACAACTGCAA CAGGCAGTAC CGCCTATTAG CGAACCGGGT CTTTCGGCAA CTTTGGAAGA AAACATCAAG GCCGGGCGTT TGTTGTTCAG CACCCAGGCC AGCGATGCGG TGGAACATGC CGGACTGATC TTCATCGCCG TGGGCACGCC GGCCGACGAA GACGGCTCCG CCGACCTCAG CCATGTGCTC AACGTGGCGC GGCAGATCGC AAGCTGCATG GAGGACGATC GGACGCTGAT CATCAAATCC ACGGTGCCGG TCGGCACGGC GGATCAGGTG CTGCACACCG CTGAAGAAGA ACTGCAGCGT CGCGGCAAAA ACGGTCTGGC GGTGCGGGTG GTGTCCAACC CCGAGTTTCT CAAGGAAGGC AGCGCCCTCG CCGACTGCAT GCGTCCGGAC AGGATCATTG TCGGCACTCT GGACCCTGAA GCCCGGGAGC AGATGAGCGA GCTGTACGCA CCGTTCTGCC GCAACCACGA AAAACTGATG TTCATGGACA ACCGCAGCGC CGAGCTGACC AAGTACGCGG CCAACGCGAT GCTCGCCACC CGCATCAGCT TCATGAACGA GCTGGCCAAC CTCACCGAAC TGCTCGGCGC CGACATCGAA GCGGTGCGCA AAGGCATCGG CTCCGATCCG CGCATCGGCT ATCACTTCAT CTACCCGGGC TGCGGCTTCG GTGGCTCGTG CTTTCCCAAG GACCTGCGCG CCCTGCTGCA CACCGCTGAA CACAACGGCA TGCCGCTGAA ACTGCTGCGC AGCGTCACCG ACGTCAACGA CGCGCAACGG CACATCCTGT TCAGCAAACT CAGGGCGCAA TTTCCTCAAG GCCTGGCCGG CAAGTCCATC GCGATCTGGG GCCTGGCGTT CAAGCCGAAT ACCGATGACA TGCGTGAAGC CCCGAGTCGT TACCTGATGG AAGCGCTGTG GGCCGAAGGC GCCAGCGTGC AGGCCTACGA TCCGGAAGCG ATGTCCGAGT GCCGGCGCAT TTACGGTTAC CGCAACGACC TGCACCTGTG TGCCACCCGC GACGACACCC TGGAAGATGC CGATGCACTA GTGATCTGCA CCGAGTGGAA AAACTTTCGT GTGGTGGACT TTGAACTGCT CGCCGAGAAG CTGCGCGCGA AGGTCATCGT CGACGGGCGC AACCTTTACA ACCCGGAACA AGTGGCGGCC GCCGGCCTGC ATTACAGCGG TATCGGTCTG CGCCACATCG CGCCCGACGA GGGGCGACCA TGA
|
Protein sequence | MDVSVFGTGY VGLIQAAALA DVGHRVLCVD IDPNKIKQLQ QAVPPISEPG LSATLEENIK AGRLLFSTQA SDAVEHAGLI FIAVGTPADE DGSADLSHVL NVARQIASCM EDDRTLIIKS TVPVGTADQV LHTAEEELQR RGKNGLAVRV VSNPEFLKEG SALADCMRPD RIIVGTLDPE AREQMSELYA PFCRNHEKLM FMDNRSAELT KYAANAMLAT RISFMNELAN LTELLGADIE AVRKGIGSDP RIGYHFIYPG CGFGGSCFPK DLRALLHTAE HNGMPLKLLR SVTDVNDAQR HILFSKLRAQ FPQGLAGKSI AIWGLAFKPN TDDMREAPSR YLMEALWAEG ASVQAYDPEA MSECRRIYGY RNDLHLCATR DDTLEDADAL VICTEWKNFR VVDFELLAEK LRAKVIVDGR NLYNPEQVAA AGLHYSGIGL RHIAPDEGRP
|
| |