| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_2020 |
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| Symbol | |
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| ID | 3716119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 2303186 |
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| End bp | 2304778 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_347752 |
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| Protein GI | 77458247 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.607405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAA AGGAAAACTA CCTGCATGAG TTCTTCAGGA TCTTCTTCGC CAACAAGCAA
CTGGTGAAGC GAGTGTTCCT GATCTTTGCG GTGATCGCGC TGGTGCTGCC GCTGCTGCTC
AAACAGAGCT TCGATATCAC CGCTCAGGTG ATCGTGCAGT CGAAAAAACT GTCGCAGGGC
GACGCCACCA CGTCGCTCAC CGTGGACAAC GCCACCTTCA TTCCGCCGTC GCTGGCGGAC
ATGGAAACCG AGAGCAATAT CCTGCGTTCG CCGGCGCTGA TCCGGCAGAC CATCAGCGAA
CTGCGTGACA AGGGCGAATA CACCCCGTCG CCCGGGATGT TCAACAAACT GGTGAGCGAG
CCGTTCAAGC GCTACATCAG CTCGCCGCTG CGCCAGTACG TGATCAACCC GGTGCGTAAC
GCCCTGGGGC TTGAGACCGA TCCGGTGCGT GACACCGCGC TCGATGCGCT GACCCAGCAA
GCCATCGACA GCCTGAAAAT CGAGACCCTG CCCGGCTCCA ACGTGATCTC GATCGTCTAT
AGCTTCCCCG ACCCGCATCA AGGCACGACT TTCGTCGCTG CCCTGTTGCA GAACTACCTG
GTGAGCCGTC AGGCGCTGCA ATCGATCGAT TTGCCGCAGT CCTTCTACGA AACCAAGAAG
CATCTCTATC AGGTGCGCCT CGATGGACTG GAAGGCAATC GTCAGGCGCT GCTGGAAAGC
GTCGGCGCGT CGGATCCGAA GGAGGAAATC ACCTTCCGCC TCAACGCGAT CAACACCGAA
GAGCAGGCGC TGAACCTGTA TCGTGACCGC CTGCTGCAGA GCCAGCGCTG GCTCGAATAC
CTCAAGACCG CGCTGGCCGC TGCCAGTAAC AGCAAACTCA ACGACTACAC CTTCCCCTAC
ACCTTCACCA CCACCGTCGA CAACGTGGCG TTCGAGGATC GGGAAATCAA ACAGATGGGC
GAGCAACTGA CCACCCAGGT CAGCCGCTAC ATGAACGATC TGGCGGTGTT CCAGCCCGGC
AGTGAACCGA TGCTGCTGAC CCGCGAGCAG ATTGCCCGCA CCCGTCAGCA GTTCCTCAAG
GTGGTGAGCA ACCGCATCCA GGAACGCACT AACGATCTGG CGGTGGTCCA GCAGGTGATC
GATCAGAAAA CCGCGCGCAT CGCCGAGTTC AAGAACCGCA TCCACGAGTT GCAGCAAACC
CAGAGCAAGC TGCGGCAGAT GGACACCGAA ATCGATGCCC TGCACGCCGC GTTCTCGACC
TACGCCCAGC GTTTTGCGGA AAGCAGCACC ACCCGCTCGC TGAGCGATGA CCTGTCCAAC
GCCCGGGTGT TGAGCCCGCC GTTCGAGCCG ACCGAAGCGG CGTTCCCCAA ACCGATGCTG
ATCATTCCGT TCGGGTTGTT CACCGGTCTG CTGCTGGCAA TTGCACTGGT CTACGTGCGT
GAGTTCTTCG ACCACCGCTT CAAACACCCG GCGCAAATCA GCCACGAGCT GGGCCTGCCG
GTGCTGCTGG TGATCAACGA CCAGAACGCG CAGCCGAGCA ACCCGCACAA GAACTGGACC
GTGCCGAGCT TCGTACACTG GGTGCGCAAT TGA
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| Protein sequence | MNPKENYLHE FFRIFFANKQ LVKRVFLIFA VIALVLPLLL KQSFDITAQV IVQSKKLSQG
DATTSLTVDN ATFIPPSLAD METESNILRS PALIRQTISE LRDKGEYTPS PGMFNKLVSE
PFKRYISSPL RQYVINPVRN ALGLETDPVR DTALDALTQQ AIDSLKIETL PGSNVISIVY
SFPDPHQGTT FVAALLQNYL VSRQALQSID LPQSFYETKK HLYQVRLDGL EGNRQALLES
VGASDPKEEI TFRLNAINTE EQALNLYRDR LLQSQRWLEY LKTALAAASN SKLNDYTFPY
TFTTTVDNVA FEDREIKQMG EQLTTQVSRY MNDLAVFQPG SEPMLLTREQ IARTRQQFLK
VVSNRIQERT NDLAVVQQVI DQKTARIAEF KNRIHELQQT QSKLRQMDTE IDALHAAFST
YAQRFAESST TRSLSDDLSN ARVLSPPFEP TEAAFPKPML IIPFGLFTGL LLAIALVYVR
EFFDHRFKHP AQISHELGLP VLLVINDQNA QPSNPHKNWT VPSFVHWVRN
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