| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_1982 |
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| Symbol | |
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| ID | 3716255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 2263533 |
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| End bp | 2265254 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | type II secretion system protein E |
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| Protein accession | YP_347714 |
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| Protein GI | 77458209 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.981524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.437395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGTC TGTCCGTTGT CGTCGAACCG CTGTCGGTCA ATCCTCCACA GGAGGCACAG
ACCCCGCCAC GCTTTTCCAG TGAGCAACTG GCCCAGGCCC GGGCACGGGC CACCACGTCC
GGGGAACGGG TGCTCGATGC ACTGGCCGTG CTCTGCGAAC TGGCGCCGAT GCCGTTCATT
GCCAGCCTCG GCGCCACCCT GCATTACCCG GTGCTCGACA CCGACACGCT GTTTCTGGCG
ACCCCGGTGT TCGACCGGGT CACCCTCGCG CAATGCCTCA AACGTGAATT CATCCTGCTG
CGCCACAACG ACGAAGTCAT CGGCGTGTTC GCCGACCCCT TCGACACGTC GCGCCTGGCC
TGGATCGACG AATGCCTGCA TGGCGCACCG CTGTATCTGG TGCATGCCGA CGACCTCAAG
GCTTATCTGG CCCGCCACGA AGAAAGTTTC CACGCCGTCG AATCGCTCAA CGCCCAGGCC
GACGCCGGCA GCGAAACCGA CACTCTGCAA AGCCTGTCGT TGACCAGCAT CAGCGAAGAT
TCGAGCGTGG TGGTGAAACT GGTCAACTCG ACCCTGTACG ACGCGCTGAA AATGCACGCC
AGCGATATCC ACCTCGGCAC CACCGGCCAG GGCCTGGTGA TCAAGTACCG GATCGACGGC
GTGCTGAACA ACATAGGCAA GATCCAGGGC AGCGAGTTCG CCGAGCAGGT GATCTCGCGG
GTCAAGGTCA TGGCCGAACT GGACATCGGC GAAAAACGCG TGCCCCAGGA CGGTCGCTTC
AAGATCGGCA TCAGCGGCCG GCAGATCGAC TTCCGGGTGT CGATCATGCC GAGCATCTTC
GGCGAAGACG CGGTGCTGCG GGTGCTGGAC AAACAGGACC TGGCCGACAA GGTCTGCGGC
GTGCAACTGC AAGCGCTGGG CTTTGAAGAC GAAACCCTGC GCCAACTGCG TCGCCTGGCT
GCCGAACCCT ACGGCATGGT ACTGGTGACC GGCCCCACCG GCAGCGGCAA GACCACCACG
CTGTACGCGA TGATCACCGA GATCAACCAC GGCGTGGACA AGATCATCAC CATCGAAGAC
CCGGTGGAAT ATCAGCTGCC GGGCGTGCTG CAAATCCCGG TCAACGAGAA AAAAGGCCTG
ACCTTCGCCC GTGGCCTGCG CTCGATCCTG CGCCACGACC CGGACAAGAT CATGGTCGGC
GAGATCCGCG ACCCGGACAC CGCACAGATC GCCGTGCAAT CGGCGCTCAC CGGTCACCTG
GTGTTCACCA CCATTCACGC CAACAACGTG TTCGACGTGA TCGGTCGTTT TACCCAAATG
GAAATCGACC CCTACAGCCT GGTCTCGGCG CTCAACGCGA TTCTTGCCCA GCGCCTGATC
CGGCTGGTGT GCAGCAGCTG CAGCACGCCG GTCAATCCGA GCGATGAAGA GCTGCGCGCC
TCGGGCCTCG ATCCACAGAA AGTCGATCAC TACCACTTCG TCCACGGCAA GGGCTGCGGC
CACTGCCGGG GCAGCGGCTA TCGCGGCCGC ACGGCGATTG CCGAGCTGCT GCACCTGGAC
GACGAACTGC GTCAGATGAT CGTCGAGCGC CAACCCATCA CCCAGATCAA AGCCCTGGCC
TGCGCCCGTG GTTTGCGCCT GTTGCGCGAA TCGGCGCTGG AACTGGTGGA GCACGGTCGG
ACCACGCTGG AGGAGATCAA TCGTGTCACT TTTATCGCGT GA
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| Protein sequence | MDRLSVVVEP LSVNPPQEAQ TPPRFSSEQL AQARARATTS GERVLDALAV LCELAPMPFI
ASLGATLHYP VLDTDTLFLA TPVFDRVTLA QCLKREFILL RHNDEVIGVF ADPFDTSRLA
WIDECLHGAP LYLVHADDLK AYLARHEESF HAVESLNAQA DAGSETDTLQ SLSLTSISED
SSVVVKLVNS TLYDALKMHA SDIHLGTTGQ GLVIKYRIDG VLNNIGKIQG SEFAEQVISR
VKVMAELDIG EKRVPQDGRF KIGISGRQID FRVSIMPSIF GEDAVLRVLD KQDLADKVCG
VQLQALGFED ETLRQLRRLA AEPYGMVLVT GPTGSGKTTT LYAMITEINH GVDKIITIED
PVEYQLPGVL QIPVNEKKGL TFARGLRSIL RHDPDKIMVG EIRDPDTAQI AVQSALTGHL
VFTTIHANNV FDVIGRFTQM EIDPYSLVSA LNAILAQRLI RLVCSSCSTP VNPSDEELRA
SGLDPQKVDH YHFVHGKGCG HCRGSGYRGR TAIAELLHLD DELRQMIVER QPITQIKALA
CARGLRLLRE SALELVEHGR TTLEEINRVT FIA
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