Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_1962 |
Symbol | |
ID | 3716274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 2238390 |
End bp | 2239313 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | LysR family transcriptional regulator |
Protein accession | YP_347694 |
Protein GI | 77458189 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGTA ACGATCTGCG CCGCGTCGAC ATGAACCTGC TGGTGATTTT CGAAGCGCTG ATGTTCGAAA AGAACCTGAC CCGCGTCGCC GAAAAACTGT TCATGGGCCA ACCGGCGGTG AGCGCGGCGC TGGGGCGTCT GCGCGATCTG TTCGATGATC CGCTGTTGCT GCGCAATGGC CGGGGCATGG AGCCGACGGC GCGGGCGCTG GCGATTCTCC AGGAGCTGCA ACCGGCGATG GACGTGATTT CCGGCGCGGT CAGCCGGGCC AAGGAATTCG ATCCGGCGAC CAGTTGCGAC GTGTTTCGCA TCGGCTTGTC GGACGATGCC GAATTCGGTC TGTTCCCGCC GCTGCTGCGC CAGTTGCAGG AAGAGGCGCC GGGGATTGTC GTGGTGGTAC GTCGCGCCAA TTACCTGCTG ATGCCGGGGT TGCTGGCTTC GGGGGAAATC TCTGTCGGCG TGAGCTACAC CACCGATCTG CCGGCCAACG CCAAACGCAA GAAATTGCGC GACATTCCCT GCAAGGTCCT GCGTGGCGAC AATCGTCCGG GCCCGCTCAC GCTTGACGAG TATTGCGAGC GCCCGCATGC GATGGTCTCG TTCTCCGGAG ACCTGAGCGG CAACATCGAC ATGGACCTGG CCAAGGTTGG CCGCAGCCGC CGTGTGGTGC TTGGTGTGCC GCAGTTCAGT GGATTGCGCG CGCTGCTGGC GGGCACCGAG ATGATCGCCA CCGTGCCGGA TTATGCGGCG TGTGCGTTGG TGGAAGGGTG TGCGTTGCGG GCTGAAGATC CGCCGTTTCC GATTGATGCG GCGCAACTGT CGATGGCGTG GAGCGGGGTG CATGACAACG ACCCGGCGGA GAAATGGCTG CGGTCGCGGA TCAGTCAGTT CATGTCGGTG ACGCTGGATA TTCCGGCGGT TTAG
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Protein sequence | MNRNDLRRVD MNLLVIFEAL MFEKNLTRVA EKLFMGQPAV SAALGRLRDL FDDPLLLRNG RGMEPTARAL AILQELQPAM DVISGAVSRA KEFDPATSCD VFRIGLSDDA EFGLFPPLLR QLQEEAPGIV VVVRRANYLL MPGLLASGEI SVGVSYTTDL PANAKRKKLR DIPCKVLRGD NRPGPLTLDE YCERPHAMVS FSGDLSGNID MDLAKVGRSR RVVLGVPQFS GLRALLAGTE MIATVPDYAA CALVEGCALR AEDPPFPIDA AQLSMAWSGV HDNDPAEKWL RSRISQFMSV TLDIPAV
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