Gene Pfl01_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1960 
Symbol 
ID3716272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2236710 
End bp2237141 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content63% 
IMG OID 
ProductAraC family transcriptional regulator 
Protein accessionYP_347692 
Protein GI77458187 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTTCCC CACCGACACG GACCTTGGCC ATGGCTCACT CACAGCAAAC CGTCGCCCTC 
GCCCCTGCCA GCGAACCCCG CAAGCCCAGC ACCGGCGGCC TCAGCCCGCA ACGGGAACGG
CTGGTGAAAC AGCTGATTCT CGACCGCCTC GGCGACAGCC TTGAAGTCAC CGAACTGGCC
AACGCCTGCG CACTCTCGCG CAGCCATTTT TCCCGGGCGT TCAAATGCAG CACAGGGTAC
TCGCCGCAAG ACTGGATCCG CACCCAGCGC ATTGCCCGCG CCAAACTGTT GATCCAGCAC
ACCAGCCACA GCCTCACGCA GATCAGCCTG GAATGCGGTT TCTGCGATCA GGCGCACTTC
TGCCACATCT TCACCCGCAG CGAAGGGATC AACCCGTTTG CGTGGCGTTG TCAGGTCATG
AAAAACCGCT GA
 
Protein sequence
MRSPPTRTLA MAHSQQTVAL APASEPRKPS TGGLSPQRER LVKQLILDRL GDSLEVTELA 
NACALSRSHF SRAFKCSTGY SPQDWIRTQR IARAKLLIQH TSHSLTQISL ECGFCDQAHF
CHIFTRSEGI NPFAWRCQVM KNR