Gene Pfl01_1861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_1861 
Symbol 
ID3716375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp2122424 
End bp2123140 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content64% 
IMG OID 
ProductMgtC/SapB transporter 
Protein accessionYP_347593 
Protein GI77458088 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCGA TCAACAATCT CAACCTCAGC TCATTGCTCG ACACGCTGGT CAGCCTCAGC 
GCGGCGTTCA TCCTCGGCGG CCTGATCGGC TTCGAGCGCC AGTACCGGCA ACGCACGGCG
GGCTTGCGCA CCAATGTGCT GGTGGCGGTC GGCGCGGCGA TTTTCGTCGA CATGGCCAAC
CGTCTCGCCG GTGCCGAAGG CGCGGTCCGG GTGGTCGCGT ATGTGGTCTC CGGCATCGGC
TTTCTCGGTG CCGGGGTGAT CATGCGCGAA GAGGGCAACG TGCGCGGCCT CAACACCGCC
GCCACGCTCT GGACCTCGGC AGCCGTCGGT GCCTGTGCCG GTGCCGACCT GCTGGCCGAA
GCGGTGCTGG GCACCTTGTT CGTGCTCGCC GCCAATACCT TGCTGCGGCC GATCGTCAAC
AACATCAACC GTCAGCCGCT CGATGTGGTC TCGGCGGAAG TCACCAACAT CGTCTATGTC
ATTGCCCGGC GCTCGCAGCA AACGGCCGTG TTCGCCCTGC TTGAAGCGGA GCTTGAACGC
AGCAACTACC CGGCCAGTGA TGTCGATGTG CACGCCTTCG GTGCCGACGA AATCGAGATC
GAAGCCACGC TCGCAACCAC GTCGGTGGAC GGCGATGAAC TGGACGCACT GGTGAAGCGG
ATTTCCACTT CAAGCCTGGT GGTGCAGGCG TTCTGGAGTC CGAGCACCAC GGAATAG
 
Protein sequence
MQAINNLNLS SLLDTLVSLS AAFILGGLIG FERQYRQRTA GLRTNVLVAV GAAIFVDMAN 
RLAGAEGAVR VVAYVVSGIG FLGAGVIMRE EGNVRGLNTA ATLWTSAAVG ACAGADLLAE
AVLGTLFVLA ANTLLRPIVN NINRQPLDVV SAEVTNIVYV IARRSQQTAV FALLEAELER
SNYPASDVDV HAFGADEIEI EATLATTSVD GDELDALVKR ISTSSLVVQA FWSPSTTE